Pairwise Alignments

Query, 316 a.a., HTH-type transcriptional regulator TreR from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., transcriptional regulator, LacI family from Pseudomonas syringae pv. syringae B728a

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 86/316 (27%), Positives = 145/316 (45%), Gaps = 34/316 (10%)

Query: 6   TILDIARLSGVGKSTVSRVLTNDPKVKPETRAKVEQVIAESGYVPSKSAQTMRGGSQKVV 65
           TI D+A L+G+  +TVS VL N   V    R KVE  IA+  YVPS  A++++  +   +
Sbjct: 3   TIKDVAALAGISYTTVSHVLNNTRPVSEPVRLKVEAAIAQLDYVPSAVARSLKAKTTSTI 62

Query: 66  GIIISRLDSPSENKAVSTMLQAFYAHGYDVVIMESQFSREKTNAHLKVLAKRQVDGVIVF 125
           G++I    +P   +    +      +G+ V++  S  + EK   +L+VL +++VDG+IV 
Sbjct: 63  GLLIPNGMNPYFAELARGIEDYCERNGFCVILCNSDDNPEKQRGYLRVLLEKRVDGLIV- 121

Query: 126 GFTDIDHDA-----LLSWQHRCVLLAMHSDEISS--INYDNAGVIERALQHLAQKQLRDI 178
             + +  DA     L   +   V++    D I +  +  D+      A +HL     R I
Sbjct: 122 --SSVGGDAGIAGGLAEVRTPLVIVDRELDGIDADMVRIDHEQGAYLATRHLLDLGHRAI 179

Query: 179 AFIGVDPRDKTTGEQRLNAY------------LNWCVEHEIVANYQTGQLHHESAYLLVD 226
           A IG  P   T  E RL  Y              W +  E      T    HE+A  L  
Sbjct: 180 ACIG-GPFHSTVAEMRLAGYRRALQQASVPVRAEWALHSEF-----TSSAGHEAACQL-- 231

Query: 227 KVLTEQTQAIVCASDTLALGVIKRLQE-LQR--DDVVVTGVGGNELLSFLFPNIFSVDPG 283
            +      AI   +D +A+GV++   E L R   D+ V G    ++  +++P + +V   
Sbjct: 232 -LAAHPPTAIFAGNDVIAIGVLRAAAERLIRVPQDLSVIGFDDIQMSRYVYPALTTVGQS 290

Query: 284 YREAGKLAADLLIEQL 299
             + G+ AA++L+ ++
Sbjct: 291 IMQLGETAAEMLLSRI 306