Pairwise Alignments

Query, 316 a.a., HTH-type transcriptional regulator TreR from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., LacI family transcriptional regulator from Sinorhizobium meliloti 1021

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 84/305 (27%), Positives = 141/305 (46%), Gaps = 12/305 (3%)

Query: 6   TILDIARLSGVGKSTVSRVLTNDPKVKPETRAKVEQVIAESGYVPSKSAQTMRGGSQKVV 65
           TI D+AR++ V  +TVSR + N  KV   TR KV Q IA +GY  +  A+++R G   ++
Sbjct: 8   TIEDVARIAEVSIATVSRAIHNPEKVAKSTRLKVNQAIAITGYTTNAMARSLRLGRSNMI 67

Query: 66  GIIISRLDSPSENKAVSTMLQAFYAHGYDVVIMESQFSREKTNAHLKVLAKRQVDGVIVF 125
            ++   +  P+ +  +  +     +HGY V+I  +Q   ++   +LK L   Q  G+I+F
Sbjct: 68  LVVAPDIGDPNFSSILVGLENEARSHGYGVLIGHTQNDAQRAVEYLKFLNSNQAAGLILF 127

Query: 126 -GFTDIDHDALLSWQHRCVLL--AMHSDEISSINYDNAGVIERALQHLAQKQLRDIAFIG 182
            G     H+ + +     V +   + +  I  +  D+     + +  L  +  R IAFIG
Sbjct: 128 TGILPFGHETIAARLPPSVGIFEPVFNGGIPYVGVDDVEGARKVVDLLIAEGHRKIAFIG 187

Query: 183 VDPRDKTTGEQRLNAY---LNWCVEHEIVANYQTGQLHHESAYLLVDKVLTEQT--QAIV 237
            D R +   ++R + Y   L+       +   Q G    ES    V+++    T   A +
Sbjct: 188 -DSRTRLAYKRRRSGYDAGLDAAGVPAELRLVQEGDGTLESGRAAVERLFVRDTLPTAFM 246

Query: 238 CASDTLALGVIKRLQELQRD---DVVVTGVGGNELLSFLFPNIFSVDPGYREAGKLAADL 294
           C +D  ALGV+  L+    D   D  VTG       +F+ P + ++       GK A  L
Sbjct: 247 CVNDQTALGVMIGLKARGYDIPRDFSVTGFDDVPQATFMTPALTTIRQPRTLIGKHAMAL 306

Query: 295 LIEQL 299
           L+E L
Sbjct: 307 LLELL 311