Pairwise Alignments

Query, 316 a.a., HTH-type transcriptional regulator TreR from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., Ribose operon repressor from Enterobacter sp. TBS_079

 Score =  101 bits (251), Expect = 3e-26
 Identities = 78/304 (25%), Positives = 146/304 (48%), Gaps = 14/304 (4%)

Query: 9   DIARLSGVGKSTVSRVLTNDPKVKPETRAKVEQVIAESGYVPSKSAQTMRGGSQKVVGII 68
           D+AR +GV  STVS V+ ND  V    R KVE  + +  Y PS  A++++    + +G++
Sbjct: 3   DVARQAGVSTSTVSHVINNDRFVSEAIREKVEAAVKDLNYAPSALARSLKLNQTRTIGML 62

Query: 69  ISRLDSPSENKAVSTMLQAFYAHGYDVVIMESQFSREKTNAHLKVLAKRQVDGVIVFGFT 128
           I+   +P  ++ V  + ++ +  GY +V+  ++   ++ N +L+ L +++VDG+++    
Sbjct: 63  ITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLCTE 122

Query: 129 DIDHDALLSWQHRCVLLAMHS----DEISSINYDNAGV-IERALQHLAQKQLRDIAFIGV 183
                  +  ++  +   M      D  S +  DN+ +  + A Q+L  K    IA I  
Sbjct: 123 THQPSKEIIQRYPSIPTVMMDWAPFDGTSDLIQDNSLLGGDMATQYLIDKGYTRIACI-T 181

Query: 184 DPRDKTTGEQRLNAYLNWCVEHEIVA--NYQ-TGQLHHESAYLLVDKVLT--EQTQAIVC 238
            P DKT    RL  YL+      +     Y+ TG       +  + K+L+  ++ QA+  
Sbjct: 182 GPLDKTPARLRLEGYLSAMARAGLTVPDGYRITGDFEFNGGFEAMQKLLSQAQRPQAVFI 241

Query: 239 ASDTLALGVIKRLQEL---QRDDVVVTGVGGNELLSFLFPNIFSVDPGYREAGKLAADLL 295
            +D +A G  + L +       D+ V G    EL  ++ P + ++     E G+LA D+L
Sbjct: 242 GNDAMAFGAYQALYQAGLRVPHDMAVIGYDDIELARYMTPPLTTIHQPKDELGELAIDVL 301

Query: 296 IEQL 299
           I ++
Sbjct: 302 IHRM 305