Pairwise Alignments

Query, 225 a.a., methionine ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score = 86.7 bits (213), Expect = 5e-22
 Identities = 66/198 (33%), Positives = 107/198 (54%), Gaps = 19/198 (9%)

Query: 24  TLYMVAIAGAVGFALGIPLGVILHTTKKEGLLENLPLNRALGAVVNIGRSVPFLVLMVAI 83
           TL +V  +     ALG+P G+++  + +   L   PL  A+       ++ P  V +V I
Sbjct: 132 TLSLVLTSVMFCIALGLPSGILMARSDRLAKLSR-PLLDAM-------QTTPAFVYLVPI 183

Query: 84  IPVTKLIVGTFIGTTAAIVPLTIGAIPFVARLIESALLEVPTGLVEAAQSMGATPLQIIR 143
           +    ++ G  IG    +V   I A+P + RL    + +VP  LVEAA+S GA+  Q++ 
Sbjct: 184 V----MLFG--IGNVPGVVVTIIFALPPLIRLTNLGIRQVPEDLVEAARSFGASKTQLLT 237

Query: 144 KVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFHRYDI---TIMAVT 200
           KV LP ALPTI+  +  TL+  +S   +A  +  GGLG + +R G  R D+   T+  V 
Sbjct: 238 KVQLPLALPTIMAGINQTLMLALSMVVIASMIAVGGLGQMVLR-GIGRLDMGLATVGGVA 296

Query: 201 VVMLIVLV-QIIQSIGDA 217
           +V+L +L+ ++ QS+G A
Sbjct: 297 IVLLAILIDRLTQSMGVA 314