Pairwise Alignments

Query, 225 a.a., methionine ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis JJ

 Score = 73.2 bits (178), Expect = 5e-18
 Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 15/196 (7%)

Query: 24  TLYMVAIAGAVGFALGIPLGVILHTTKKEGLLENLPLNRALGAVVNIGRSVPFLVLMVAI 83
           TL ++  +  +   LGIPLG++   +K    L        L  ++++ +++P L  ++  
Sbjct: 93  TLSLIITSTLIALLLGIPLGIVKARSKLVSTL--------LDPMLDVMQTLPSLAYLIPA 144

Query: 84  IPVTKLIVGTFIGTTAAIVPLTIGAIPFVARLIESALLEVPTGLVEAAQSMGATPLQIIR 143
           +    L  G  IG    ++   I A+P   +L    + +V   L+E  ++ G T  QI+ 
Sbjct: 145 V----LFFG--IGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGRAFGGTSWQILT 198

Query: 144 KVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFHRYDITIMAVTVVM 203
           K+ LP A+P+I+  V   ++   S   +AG +G GGLG+V I  G  RY +       + 
Sbjct: 199 KIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIIS-GIQRYSLAPALEAGIA 257

Query: 204 LIVLVQIIQSIGDALV 219
           +  L  I   I   LV
Sbjct: 258 VTFLAVIFDRITRNLV 273