Pairwise Alignments

Query, 225 a.a., methionine ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 276 a.a., glycine betaine/L-proline transport system permease (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 87.0 bits (214), Expect = 3e-22
 Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 19/200 (9%)

Query: 21  TWQTLYMVAIAGAVGFALGIPLGVILHTTKKEGLLENLPLNRALGAVVNIGRSVPFLVLM 80
           T QTL +V  +  +   LG+PLG+    + +         N+ +  V++  +++P  V +
Sbjct: 85  TMQTLALVLSSTCLALLLGVPLGIWTANSDR--------CNKIMRPVLDFMQTMPAFVYL 136

Query: 81  VAIIPVTKLIVGTFIGTTAAIVPLTIGAIPFVARLIESALLEVPTGLVEAAQSMGATPLQ 140
           +  +    L  G  +GT        I A+P V RL    + +VP  +VEA++S GATP Q
Sbjct: 137 IPAV----LFFG--LGTVPGAFATIIFAMPPVVRLTGLGIRQVPKNVVEASRSFGATPWQ 190

Query: 141 IIRKVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFHRYDITI---- 196
           ++ KV LP ALPTIL  +  T++  +S   +A  +  GGLG++ ++ G  +  I +    
Sbjct: 191 LLYKVQLPLALPTILTGINQTIMMSLSMVVIAAMISAGGLGEIVLK-GITQMKIGLGFEG 249

Query: 197 MAVTVVMLIVLVQIIQSIGD 216
               V++ IVL +I Q + D
Sbjct: 250 GIAVVILAIVLDRITQGMAD 269