Pairwise Alignments

Query, 269 a.a., methionine ABC transporter substrate-binding protein MetQ from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., NLPA lipoprotein from Pseudomonas syringae pv. syringae B728a

 Score =  132 bits (333), Expect = 6e-36
 Identities = 88/243 (36%), Positives = 122/243 (50%), Gaps = 4/243 (1%)

Query: 29  DNNKVKIGVMAGAEAQVAEVAAKVAKEKYNLDVELVTFTDYVTPNAALDDGSIDANAFQH 88
           D+  +K+G  A A A   E A + A  K  L VELV FTD++ PN +L  G ID N FQH
Sbjct: 20  DDKPLKVGTTA-AFAIPLEAAVEEAG-KQGLKVELVEFTDWIAPNVSLAAGDIDVNYFQH 77

Query: 89  KPYLDKQIADRGYKLAIVGNTFVYPIAGYSKQIKSVDELQDGARIAVPNDPTNLGRSLLL 148
            P+L       G+ L       +  +  YSK+ K  DEL  GA +A+ NDP N GR L L
Sbjct: 78  IPFLTNANEAAGFGLVPYAPGIINNVGLYSKKYKRFDELPTGATVAIANDPINSGRGLQL 137

Query: 149 LQQQGLLKLREDVGLLATVRDIVENPKKLEILELDAAQLPRSLDDVALSIINTTYASSIN 208
           L + GL+ L+E VG  AT  DI  NPKKL++++++A QL R+ DD  L      Y     
Sbjct: 138 LAKAGLVTLKEGVGYKATEEDITANPKKLKLIQVEAVQLVRAYDDADLVQGYPAYIRLAK 197

Query: 209 LTPEKDGIFVENKESP-YVNILVAREANVNAENVQNFKKAYQTDEVAKAASEIFQGGAVK 267
             P    I  +  + P YV   V +  + +   +  F   YQ   V +A+ +   G   +
Sbjct: 198 TFPADSAILFDGLDHPEYVIQFVIKPDHKDDPRLAKFVDIYQHSPVVRASLDKVNGKLYQ 257

Query: 268 -GW 269
            GW
Sbjct: 258 AGW 260