Pairwise Alignments

Query, 269 a.a., methionine ABC transporter substrate-binding protein MetQ from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., NLPA lipoprotein from Pseudomonas syringae pv. syringae B728a

 Score =  187 bits (474), Expect = 3e-52
 Identities = 104/260 (40%), Positives = 151/260 (58%), Gaps = 9/260 (3%)

Query: 8   LLTIAAAASTLILAGCGEKAVDNNKVKIGVMAGAEAQVAE-VAAKVAKEKYNLDVELVTF 66
           LLT  AA  ++ LA  GEK V      +G      A++ + +   +AKE   +D+E+  F
Sbjct: 6   LLTALAAVFSIGLAHAGEKLV------VGATPVPHAEILKLIQPTLAKE--GVDLEIKVF 57

Query: 67  TDYVTPNAALDDGSIDANAFQHKPYLDKQIADRGYKLAIVGNTFVYPIAGYSKQIKSVDE 126
           TDYV PN  L +  +DAN FQ KPYLD     +G  L       V P  GYSK+ KSV +
Sbjct: 58  TDYVQPNVQLSEKRLDANYFQTKPYLDGFNKGKGTNLVTGVGVHVEPFGGYSKKYKSVKD 117

Query: 127 LQDGARIAVPNDPTNLGRSLLLLQQQGLLKLREDVGLLATVRDIVENPKKLEILELDAAQ 186
           L +GA IA+PN+ +N GR+L+LL + GL+ L++    L+T +DI  NPK  +  EL++A 
Sbjct: 118 LPEGATIAIPNEGSNAGRALILLDKNGLITLKDPKNALSTPKDIASNPKNFKFRELESAV 177

Query: 187 LPRSLDDVALSIINTTYASSINLTPEKDGIFVENKESPYVNILVAREANVNAENVQNFKK 246
           LPR+L  V L++INT YA    L P+KD + +E  +SPYVN LV RE N + + ++   K
Sbjct: 178 LPRALSQVDLALINTNYALEAKLNPKKDALIIEGSDSPYVNFLVTREDNAHTDAIEKLSK 237

Query: 247 AYQTDEVAKAASEIFQGGAV 266
           A  + EV    ++ + G  +
Sbjct: 238 ALTSQEVKDFINKKYDGAVL 257