Pairwise Alignments

Query, 269 a.a., methionine ABC transporter substrate-binding protein MetQ from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., MetQ/NlpA family ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

 Score =  194 bits (493), Expect = 2e-54
 Identities = 102/261 (39%), Positives = 154/261 (59%), Gaps = 4/261 (1%)

Query: 9   LTIAAAASTLILAGCGEKAVDNNKVKIGVMAGAEAQVAEVAAKVAKEKYNLDVELVTFTD 68
           L  AAAA   + A     A     V+IG  AG  A++   A  +A  K  ++V++  FTD
Sbjct: 5   LIFAAAAFAALTAAA--PAFSTEVVRIGTTAGPYAEILRYAGDLAA-KQGIEVKITEFTD 61

Query: 69  YVTPNAALDDGSIDANAFQHKPYLDKQIADRGYKLAIVGNTFVYPIAGYSKQIKSVDELQ 128
           Y  PNAAL    +D N FQH+PYLD Q+A RGY +  +  + + PI  YS ++K++ +++
Sbjct: 62  YTVPNAALAQDDLDINNFQHQPYLDNQVAQRGYDIVSIAKSIIVPIGIYSNKVKTLTDIK 121

Query: 129 DGARIAVPNDPTNLGRSLLLLQQQGLLKLREDVGLLATVRDIVENPKKLEILELDAAQLP 188
           DGA  A+PNDP+N  R+L L ++ GL+KL+  +G+ AT+ DI ENPK L+I+ELDAAQLP
Sbjct: 122 DGASAAIPNDPSNGARALQLFEKAGLIKLKPGIGIKATIADIAENPKHLKIVELDAAQLP 181

Query: 189 RSLDDVALSIINTTYASSINLTPEKDGIFVENKESPYVNILVAREANVNAENVQNFKKAY 248
           RSL+D+  S +N  YA S  L P K  + +E  ++ +  +   R  N +   ++ F + Y
Sbjct: 182 RSLNDLDFSAVNLNYALSAGLDP-KSALLLEGADTNWNLVFAVRAKNKDNATLKKFVEIY 240

Query: 249 QTDEVAKAASEIFQGGAVKGW 269
           ++ EV     + F G  +  W
Sbjct: 241 RSPEVKAFTEKRFNGTILTTW 261