Pairwise Alignments

Query, 258 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  361 bits (927), Expect = e-105
 Identities = 169/257 (65%), Positives = 203/257 (78%), Gaps = 2/257 (0%)

Query: 1   MYVVELEFECFDNTTISAVDKAINGLMDALRYNGQVLGREFPIVLGDGVFYVRAVCPEKE 60
           M+V EL FECF +TTISA ++AIN L++A R NGQVLGREF +   DG F VR + PEK 
Sbjct: 1   MFVTELRFECFADTTISAAERAINQLLEAYRANGQVLGREFAVAFNDGEFRVRLLTPEKN 60

Query: 61  SLHPKFHSEYVEACVSRLSEASLLAPKVRILGLDINSEQAAEEEMPSWQVLYTTYVHTCS 120
           SL  ++HS +V+  ++ L++A LLAP+ + +G DINSE  +  E PSWQ+LYT+YVH CS
Sbjct: 61  SLTHRYHSPWVKKALAELTDAKLLAPREKFIGQDINSE-VSNTEPPSWQLLYTSYVHMCS 119

Query: 121 PLRSGESLLPIPLYRNPPTFNGDHKAVIKWQTEWQACDELQMAGACKAEHAALHEICDVD 180
           PLRSG++LLPIPLY+ P TFNGDHK +I+WQ+EWQACDELQMA A KAE AAL E+    
Sbjct: 120 PLRSGDNLLPIPLYQIPATFNGDHKRIIRWQSEWQACDELQMAAATKAEFAALEELSSPT 179

Query: 181 SDLFRRGWDLRGRIEFLTQVPTYYYQYRVGGSSLAQEKARPCPKCGGE-WLLDEPLHDIF 239
           SDLFRRGWDLRGRIE+LT +PTYYY YRVGG  LA E ARPCP+CG   W LDEPL D+F
Sbjct: 180 SDLFRRGWDLRGRIEYLTHIPTYYYLYRVGGQDLASELARPCPRCGSHAWKLDEPLLDMF 239

Query: 240 HFRCEPCRIVSNISWDH 256
           HFRCEPCRIVSN+SWDH
Sbjct: 240 HFRCEPCRIVSNLSWDH 256