Pairwise Alignments

Query, 198 a.a., SecY-interacting protein from Vibrio cholerae E7946 ATCC 55056

Subject, 215 a.a., SecY interacting protein Syd (RefSeq) from Shewanella amazonensis SB2B

 Score =  109 bits (273), Expect = 3e-29
 Identities = 67/182 (36%), Positives = 97/182 (53%), Gaps = 5/182 (2%)

Query: 20  SVVQALSAFSQRFLQHCAQQTGQLPENDELLGLASPCVVEELT----DVVRWRPVNREVW 75
           S + AL+ F + +     ++ G+LP      G  SPC+ ++      +   W+ V R   
Sbjct: 2   SCLAALTKFHEIYKAAFVERLGELPRCFTH-GRPSPCLADDALAGSEEPQPWQMVPRREV 60

Query: 76  ADFSNVERAIELTLHEDIKAFYASQFSADMPAQWRGRELTLLQVWSEDDFTRLQENILGH 135
           A F+NV  A+++ LH DI  FY   F   +       E  L+Q+W+EDDF  LQ+NILGH
Sbjct: 61  AVFNNVSHAMDIELHHDIDDFYGHLFGGPLQFDSPWGEGELIQIWNEDDFVLLQQNILGH 120

Query: 136 LVMQRRLKQKPTVFIATTEDEMAVVSVCNLSGNVILEKLGTAQREVLTADLETFLEQLEP 195
           L+M+++LKQ  T F+    D   +VSV N  G V  E  G    E L   LE FL+QL+P
Sbjct: 121 LMMKKQLKQPQTWFVGLIGDVDEMVSVNNADGTVWREVAGQEPHEQLAESLEAFLQQLKP 180

Query: 196 KV 197
           +V
Sbjct: 181 RV 182