Pairwise Alignments

Query, 753 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 720 a.a., TPR repeat-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score = 87.4 bits (215), Expect = 2e-21
 Identities = 151/703 (21%), Positives = 285/703 (40%), Gaps = 84/703 (11%)

Query: 69  RDEADSRTRTPGSTVDAL--MILALALDNLGEHEQAQQILRDANALTEQY----QLPYLH 122
           R++ +   +  G + D    ++  LA  N+  + +++   +DAN L E      Q P+  
Sbjct: 55  REQFERAAQEQGYSSDEFEHILQLLARLNMEPNVKSKVGFQDANTLIELLASIAQTPFEQ 114

Query: 123 LDVQILSTRLIWQKEGDAQAA----RERIQKINEQYQVIENADQIAKGIDYKLTLLSAEI 178
             V +L  R I + E   Q A     E + +IN+ Y             D +  LL   I
Sbjct: 115 ATVAMLKGRYIGRTEQKYQEAIAFYNEALTRINDSY-------------DVESMLLKHTI 161

Query: 179 ASKANELELADKLFAKAKPYLDTLQN--EKPAIEYHLTLGEHNLSHG-RYNLALSELLIA 235
                 L L  +    A  +  T ++   K   +Y +   E  L H    N  L++ L  
Sbjct: 162 HEHLGGLHLVIRQDVPALMHFHTYRDIAYKLRNDYLIAAAESKLGHYYNKNQQLTKSLQH 221

Query: 236 YWSAIE----NNAGVLLAQANTLLGKLFFNRQVLDKALDHFSQAADFYGRYEQSPFLSAV 291
           Y  AI     +N   +       L K++ + +  D+AL +  +AA  + +     +LS+ 
Sbjct: 222 YSEAIRLSNRSNYPSMKTHLQLQLAKVYRDLKQWDEALKNAHEAAAGFKKLGNDTYLSSC 281

Query: 292 LKQMGDVYYQQGKYNLALVHYFNVIDHQNNQSSLSDEIEIRINLSATYLQLYNYPVAEQY 351
           +  +  VY +QG +N A+ +Y N       + +   +     NL   Y  L +   A +Y
Sbjct: 282 MTVIAMVYGEQGDWNRAIDYYLNAQQLDAKRGNYIAQGLNFHNLGQAYSHLDDEANALKY 341

Query: 352 LTSAEELLGMADIPRLNGHAALLHSGLAYYQEINQDIVRYAEMALHIGQSIQDDELQEQA 411
           L  A ++           +  LL   +A  +E    ++ +AE AL +   ++  + Q+ A
Sbjct: 342 LLMANQIFVEKQSHHYLVYNELLIGEIAQAKEDWSLMMSHAENALALATDLKLQDEQKSA 401

Query: 412 YRLLSLGYERTGSAAKALDNFKKSQVLAQKRQNKL--NQISEDAFRQQREFIEQTLHLVG 469
              ++L  E+    AK +   K+   L+Q  +N    + +S     +Q+  +E ++ L G
Sbjct: 402 LTQIALSAEKLNDQAKVISTQKRIIELSQASENTAQDSSVSSSVLAEQQLKLELSM-LQG 460

Query: 470 QEKQLQETNNQFSQLRKVALFLLSISLVLFLITLRRGYLIQGFQDQISELHDTLFTHSRS 529
           +     ET    ++L  ++  + ++ LV  +I L +                      ++
Sbjct: 461 KLNDAIETTKNTNKLLALSGLIATLLLVGIVILLNQ--------------------RRKT 500

Query: 530 RLSNLRMLNAKLPSSLENSNRNYEQWQLGELIRQPLNDRLRFVLIDIPFMRNMYLQNGYT 589
           R  N  +L   L       ++ Y    L +L + P N     + +         ++ G  
Sbjct: 501 RRQNAALLAVSLQEPF-TQHQGYAA-LLKDLAQPPANASTTALAL---------IEFGEH 549

Query: 590 AGLELERAFGKFLKTKIKEPDRLYHFSDASLL---YIEKNG------SERSEPEILFNQI 640
              +L    G++    I +  +L H    SLL   Y+ + G      +E  EP+ + + +
Sbjct: 550 VNTDLNH--GQYFANAITQ--QLTHHIGNSLLMPVYVIRQGLFAVRFTEALEPQQVLHTL 605

Query: 641 QSWLNDFAPERKINRIVRIGIADYPFLPRAYTAINDKELLDILLMATNIARELSLSEGQS 700
           + +L+     + ++    +G+ + P L +A   I  K L + + MA   AR  SL    S
Sbjct: 606 RRYLDG----KGLSHSFNLGLINLPLLAKAEIKIAPKLLFETVQMALAGAR--SLPNDTS 659

Query: 701 HWVYFKAIDNAPAASFASENIRLSCKQAINQGLIKVHSSYKNE 743
           H+V  +A+D  P   FA+  + L  ++ I +GLI+V +    E
Sbjct: 660 HYVCLRALDFVPPTLFANP-LFLHLEKGIERGLIRVDTDAPKE 701