Pairwise Alignments

Query, 524 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  161 bits (407), Expect = 8e-44
 Identities = 111/402 (27%), Positives = 202/402 (50%), Gaps = 3/402 (0%)

Query: 117 LLRVPGLPAKIKRDLRDLLSFSAAQPLEKTQQALRLLEIYERAVKIQCANPNLALNELTQ 176
           L  VP + A    +  +L+    AQ L     +L   E+ E       A+   AL +  +
Sbjct: 282 LAEVPPVVAPALENPDELMPEEPAQALPAP--SLPPAELDEPLEGADVADAQYALPDSPE 339

Query: 177 QADRELLHRLAVDLQHLITELDFNGESGDQLTDIRTKLLLGVNTHTLLELTLEVLRLVVD 236
            +   +   +   L  L+ +L        Q   +  +L  G+N + LL +  ++  L++ 
Sbjct: 340 PSYSSVAKHIEDTLLGLLGDLTLPERHRPQAEAMCERLRNGLNWYELLPILDDLAVLMLA 399

Query: 237 GSHAERKAAEAFLEQVNLSIGNNLKSATQNLEQSQSYMAHRQEMNGELSSLVARSQTALK 296
            +   +   EA+L+++N  + +   S     E     ++  +EM+ ++   V   Q+++K
Sbjct: 400 ITDTGQHEFEAYLQRLNDRLESFQSSLQAASEDHAENLSASREMDTQIREQVDGLQSSVK 459

Query: 297 EQTELEQLKLKMAPLLREM-SSLSERLLLAEQREQALLERMRYSKDQMEALSDLAQDYRR 355
           +  +LE LK  +   L  +  ++       +QREQ +  R++   D++  +   AQ  R 
Sbjct: 460 DADDLEGLKQVLENHLEGLLGTMDHHRQQRDQREQEVSARLKSLADRVALMEQDAQVVRE 519

Query: 356 RLEDQALRAQLDPLTKVYNRSSFTERLEHEYRRWIRTQHNLRVVLFDIDKFKSINDSFGY 415
            LE+Q  +A +DPLT + NR++++ERLEHE  +W +  ++L + + D+D FK IND++G+
Sbjct: 520 NLEEQRQKALIDPLTGLPNRAAWSERLEHEVAQWQQHGNSLLLAMLDLDHFKRINDNYGH 579

Query: 416 TAGDKALSIIARTIKKELRDSDTVARFSGEEFILLLPERSDNESYQIIHQIQLNVSKLPF 475
            AGD+ L +IA  ++K LR  D +ARF GEEF+LL+P  S     ++   ++L +   PF
Sbjct: 580 LAGDRVLKLIASVLRKRLRSGDFIARFGGEEFVLLVPNTSLAAGAKLAEALRLAIEGCPF 639

Query: 476 KFRDKSLTITLSAASIRFMDSDTPETVLDRLNLTLSEAKHIG 517
            F+ + +T+T+S     F   +  + VL R +  L  AK  G
Sbjct: 640 HFKGEPVTVTVSIGLTAFKPGEHSDLVLKRADQALYRAKSSG 681