Pairwise Alignments

Query, 524 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC sensor from Pseudomonas fluorescens FW300-N2E2

 Score = 85.5 bits (210), Expect = 3e-21
 Identities = 68/205 (33%), Positives = 106/205 (51%), Gaps = 15/205 (7%)

Query: 332 LLERMRY-SKDQMEALS-DLAQDYRRRLEDQALRAQL--------DPLTKVYNRSSFTER 381
           L+ R+RY S+  M  L  D A    R  + Q L   L        D LT + NR  F E 
Sbjct: 126 LVARIRYHSRSYMMLLQRDAAYRALRVSQQQLLDTNLVLQRLMNSDGLTGLSNRRHFDEY 185

Query: 382 LEHEYRRWIRTQHNLRVVLFDIDKFKSINDSFGYTAGDKALSIIARTIKKEL-RDSDTVA 440
           LE E+RR +R Q  L +++ D+D FK+ ND+FG+  GD+AL  +A  I++   R SD  A
Sbjct: 186 LELEWRRAMRDQSQLSLLMIDVDYFKAYNDNFGHLEGDEALRKVATAIREACSRPSDLPA 245

Query: 441 RFSGEEFILLLPERSDNESYQIIHQIQLNV--SKLPFKFRD--KSLTITLSAASIRFMDS 496
           R+ GEEF L+LP  S   +  +  +++  V   K+P    D  ++LTI++  ++I     
Sbjct: 246 RYGGEEFALVLPGTSPGGARLMAEKLRQGVVALKIPHTTPDGGENLTISIGVSTITPQQG 305

Query: 497 DTPETVLDRLNLTLSEAKHIGPSQL 521
                ++   +  L  AKH G +++
Sbjct: 306 GDCRQLISAADKGLYLAKHNGRNRV 330