Pairwise Alignments

Query, 524 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 632 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  166 bits (420), Expect = 2e-45
 Identities = 106/359 (29%), Positives = 192/359 (53%), Gaps = 13/359 (3%)

Query: 170 ALNELTQQADRELLHRLAVDLQHLITELDFNGESGDQLTDIRTKLLLGVNTHTLLELTLE 229
           AL +  + A   +  R+   L +L+  L    +   QL  +R ++  G+N + L+ +  +
Sbjct: 277 ALPDSPEPAFSVVADRVEATLSNLLDNLHLPEQHQPQLQTLRARIQHGLNWYELVPVLDD 336

Query: 230 VLRLVVDGSHAERKAAEAFLEQVNLSIG---NNLKSATQNLEQSQSYMAHRQEMNGELSS 286
           +  L++  S   ++  E++L+ +N  +     NL +A Q   + +      Q ++ EL  
Sbjct: 337 LAMLMIAFSDQGQRDFESYLQTLNERLSAMQENLLAAHQGHSEGRDAA---QALDEELRE 393

Query: 287 LVARSQTALKEQTELEQLK----LKMAPLLREMSSLSERLLLAEQREQALLERMRYSKDQ 342
            V   Q ++++ T+L  LK     ++  LL  + +  ++     Q+EQ L ER++    +
Sbjct: 394 QVGGLQHSMRQATDLTSLKKVVEARLDGLLDTVDTYRQQ---RSQQEQKLGERLQQLVSR 450

Query: 343 MEALSDLAQDYRRRLEDQALRAQLDPLTKVYNRSSFTERLEHEYRRWIRTQHNLRVVLFD 402
           + +L   A+  R  LE+Q  +A  DPLT + NR+++ ERL+ E+ RW R   +L + + D
Sbjct: 451 VGSLEQAARGLRGHLEEQRQKALQDPLTGLPNRAAWNERLDLEFARWQRYGGDLLLAVLD 510

Query: 403 IDKFKSINDSFGYTAGDKALSIIARTIKKELRDSDTVARFSGEEFILLLPERSDNESYQI 462
           +D FK +ND +G+ AGD+ L II   ++K LR +D +ARF GEEF++LLP        Q+
Sbjct: 511 VDHFKRVNDGYGHLAGDRVLKIIGSELRKRLRKTDFIARFGGEEFVVLLPNTPYEAGQQL 570

Query: 463 IHQIQLNVSKLPFKFRDKSLTITLSAASIRFMDSDTPETVLDRLNLTLSEAKHIGPSQL 521
           +  ++ ++S  PF F+ + + ITLSA    F + DT E   +R +  L  AK+ G +++
Sbjct: 571 MDALRDSISNCPFHFKGERIVITLSAGLTAFGEDDTTERAFERADGALYRAKNAGRNRV 629