Pairwise Alignments

Query, 524 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 690 a.a., GGDEF domain protein from Pseudomonas syringae pv. syringae B728a

 Score =  161 bits (408), Expect = 6e-44
 Identities = 96/333 (28%), Positives = 187/333 (56%), Gaps = 7/333 (2%)

Query: 193 LITELDFNGESGDQLTDIRTKLLLGVNTHTLLELTLEVLRLVVDGSHAERKAAEAFLEQV 252
           L+ +L  +     Q+ D++ +L  G+N + LL +  ++  L++  ++  ++    +L+Q+
Sbjct: 358 LLDDLTLSEHFRPQVEDMQLRLKHGLNWYELLPILDDLAVLMLAINNGGQQEFGTYLKQL 417

Query: 253 NL---SIGNNLKSATQNLEQSQSYMAHRQEMNGELSSLVARSQTALKEQTELEQLKLKMA 309
           N    S  ++L++A+++  + QS     +++N +L   V   Q+++++ ++L  LK  + 
Sbjct: 418 NERLESFQSHLQAASEDHAEDQSTA---RDLNEQLREQVGGLQSSVQDASDLPSLKRVLD 474

Query: 310 PLLREM-SSLSERLLLAEQREQALLERMRYSKDQMEALSDLAQDYRRRLEDQALRAQLDP 368
             L  +  ++    L  + RE+ +  R++    ++ ++   A  +R  LE+Q  +A +DP
Sbjct: 475 NRLEALLGTMDHYQLKRDAREREVASRLQGLAARVASMEQEALGFRTHLEEQRQKALIDP 534

Query: 369 LTKVYNRSSFTERLEHEYRRWIRTQHNLRVVLFDIDKFKSINDSFGYTAGDKALSIIART 428
           LT + NR+++ ERLE E  RW   +++L V + D+D FK IND +G+ AGDK L I+A  
Sbjct: 535 LTGLPNRAAWGERLEREMARWHEEKNSLLVCILDLDHFKRINDGYGHLAGDKVLKIVANV 594

Query: 429 IKKELRDSDTVARFSGEEFILLLPERSDNESYQIIHQIQLNVSKLPFKFRDKSLTITLSA 488
           + K LR  D +ARF GEEF++LLP        +++ +++  V   PF F+ + +TIT+S 
Sbjct: 595 LSKRLRADDFMARFGGEEFVMLLPATPPATGLKLLDELRAAVESCPFHFKGERVTITVSI 654

Query: 489 ASIRFMDSDTPETVLDRLNLTLSEAKHIGPSQL 521
               F  S+  +T + R +  L +AK  G +++
Sbjct: 655 GMTAFRPSERSDTAIKRADQALYKAKENGRNRI 687