Pairwise Alignments

Query, 524 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1099 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC and GAF sensors from Synechococcus elongatus PCC 7942

 Score = 91.3 bits (225), Expect = 2e-22
 Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 5/171 (2%)

Query: 354  RRRLEDQALRAQLDPLTKVYNRSSFTERLEHEYRRWIRTQHNLRVVLFDIDKFKSINDSF 413
            R  L  + LR   DPLT ++NR    E  E E  R  R+  ++ +++ DID FK  ND F
Sbjct: 902  RETLRQENLR---DPLTGLFNRRYLQEFFEQELARAKRSGDSIGILMLDIDYFKRFNDEF 958

Query: 414  GYTAGDKALSIIARTIKKELRDSDTVARFSGEEFILLLPERSDNESYQIIHQIQLNVSKL 473
            G+ AGD  L  +AR +  ++R SD V RF GEE  +L+P  S   S +   QI+  +++L
Sbjct: 959  GHDAGDMVLKQVARALLNQVRASDVVCRFGGEEIAILMPGASLEVSARKADQIRQAIAQL 1018

Query: 474  PFKFRDKSL-TITLSAASIRFMDSD-TPETVLDRLNLTLSEAKHIGPSQLV 522
               + +++L ++T+S     F +S    +T++   + +L +AK  G + +V
Sbjct: 1019 IISYHEQTLPSLTISIGVAAFPESGLASDTLIKSADTSLYQAKAAGRNCVV 1069