Pairwise Alignments

Query, 524 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 649 a.a., GGDEF family protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 85.9 bits (211), Expect = 4e-21
 Identities = 97/367 (26%), Positives = 159/367 (43%), Gaps = 45/367 (12%)

Query: 198 DFNGESGDQLTDIRTKLLLGVNTH---------TLLELTLEVLRLVVDGSHAERKAAEAF 248
           D+  E G +L  + T    G+ +H         TL+E  L   R +  G   E  + ++ 
Sbjct: 208 DYCQEHGWRLITVMTIKSRGLISHESNLIEDAITLMEQALAEYRTL--GFQLEIASTQSA 265

Query: 249 LEQVNLSIGNNLKSATQNLEQSQSYMAHRQEMNGE---LSSLVARSQ---TALKEQTELE 302
           L +  L IG+  K+    +E   S  A  + +      +++L ARS    TA + Q    
Sbjct: 266 LAKAYLDIGDWEKAEAAAVEAIDSKGADNKALKDAWYVMATLKARSNDFVTAYEAQKHEN 325

Query: 303 QL--KLKMAPLLREMSSLSERLLLAEQ-REQALLERMRYSK-DQMEALSD---------- 348
               +L      REM+  + +    EQ RE ALL   R S   + E +S           
Sbjct: 326 HYANELLNETKAREMAYQAAKFNFVEQQREIALLNSERDSYLVRQETISREHSGSLMIST 385

Query: 349 ------------LAQDYRRRLEDQALRAQLDPLTKVYNRSSFTERLEHEYRRWIRTQHNL 396
                       LA    +R +   L AQ D LT  YNR++  E+ E+     +      
Sbjct: 386 VLAGITLFLSVFLATGLSQRNKYMRL-AQRDGLTGTYNRATGQEKGENALIGCMARGEPT 444

Query: 397 RVVLFDIDKFKSINDSFGYTAGDKALSIIARTIKKELRDSDTVARFSGEEFILLLPERSD 456
             VL D+D FK IND FG+  GD  L  +   I+ +L D   + RF GEEF+L+LP  S 
Sbjct: 445 AAVLLDLDNFKRINDEFGHATGDWTLKKVVEVIRPQLADDHILCRFGGEEFMLILPGLSG 504

Query: 457 NESYQIIHQIQLNVSKLPFKFRDKSLTITLSAASIRFMDSD-TPETVLDRLNLTLSEAKH 515
            ++ ++  + +  ++ +   +   S  +T S     +   D + + ++ R +L L  AKH
Sbjct: 505 AQAVEVAERCREAIAGVNTHYSGHSFKLTASFGVTEWQHGDLSLDPMIKRADLALYRAKH 564

Query: 516 IGPSQLV 522
           +G +++V
Sbjct: 565 LGRNRVV 571