Pairwise Alignments

Query, 524 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  223 bits (569), Expect = 1e-62
 Identities = 144/508 (28%), Positives = 273/508 (53%), Gaps = 13/508 (2%)

Query: 13  AELQKLKSQLEQVRLTQRDTSFKFNREQQVLKRMVTSLATTCRGSSSRLNQSLEELCFAL 72
           +++  L+ +L   ++   + + +  + Q  L + +  L+  C+G S  L+  L +L   L
Sbjct: 9   SQVSLLQQKLHSAKIALAELNDQKAQSQSSLLQFIGHLSLACKGQSIELDNKLAKLRHNL 68

Query: 73  EQQKDISTLIPKLAVLERMLKQQSLAMDKQTSHLDSQLQHSGETLLRVPGLPAKIKRDLR 132
              + I  ++P L  +E++LKQQ   +  Q     + L      L RV  +P K+K+++ 
Sbjct: 69  INVEHIDEVLPDLLEVEQLLKQQYHHVMGQLEDGRASLAKVIRQLQRVDSVPDKLKKEIA 128

Query: 133 DLLSFSAAQPL----EKTQQALRLLEIYERAVKIQCANPNLALNELTQQADRELLHRLAV 188
                   +P     +   +  RL+  +E  +  Q +  +  L  L +   R+L H LA 
Sbjct: 129 -YYKQDLGKPFHTYWDYFPKVERLVGFFEAIMHEQLSQGD-KLEVLPKH--RQLAHELA- 183

Query: 189 DLQHLITELDFNGESGDQLTDIRTKLLLGVNTHTLLELTLEVLRLVVDGSHAERKAAEAF 248
               +I+E++F  +  DQ+  I+  L   ++   L++    +L L+++    E+ A++ F
Sbjct: 184 ---QMISEIEFRKDQRDQVLVIKDYLAAEIDVDGLIDAYQTILSLLLENIALEKSASQEF 240

Query: 249 LEQVNLSIGNNLKSATQNLEQSQSYMAHRQEMNGELSSLVARSQTALKEQTELEQLKLKM 308
           L  +N ++    +    +   +Q     ++++N E++S V     A+ +  +++ LKL++
Sbjct: 241 LYALNDALSAVREVVNDSYNSNQRSYQLKKQLNREINSRVDNVGDAIIDIDDIDHLKLQV 300

Query: 309 APLLREMSSLSERLLLAEQREQALLER-MRYSKDQMEALSDLAQDYRRRLEDQALRAQLD 367
              L  + +   R    EQREQA+L + M   +D++  LS  A  Y+ RL +Q     LD
Sbjct: 301 TEQLASIRTALGRKEALEQREQAMLRKSMETMRDELNELSKEANAYKERLFEQQKLNLLD 360

Query: 368 PLTKVYNRSSFTERLEHEYRRWIRTQHNLRVVLFDIDKFKSINDSFGYTAGDKALSIIAR 427
            LT++ NR++  ER+E E+R + R +H L V + DID FKSIND+FG++ GDK L +IA 
Sbjct: 361 TLTQLPNRAALEERMEQEFRNYQRHRHPLWVAVADIDHFKSINDNFGHSTGDKTLQVIAM 420

Query: 428 TIKKELRDSDTVARFSGEEFILLLPERSDNESYQIIHQIQLNVSKLPFKFRDKSLTITLS 487
            +K  LR+S+ VAR+ GEEF+LL+P+ S N+  Q++++++  V  +PFKF+++ +T+T+S
Sbjct: 421 ALKNSLRESEFVARYGGEEFVLLIPDVSANDIEQLLNRVREKVKNIPFKFKNQRITVTVS 480

Query: 488 AASIRFMDSDTPETVLDRLNLTLSEAKH 515
             + + ++++      +R +  L +AKH
Sbjct: 481 IGAAQILENEQISETFERADAALYKAKH 508