Pairwise Alignments

Query, 524 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 97.4 bits (241), Expect = 1e-24
 Identities = 51/170 (30%), Positives = 92/170 (54%), Gaps = 3/170 (1%)

Query: 353 YRRRLEDQALRAQLDPLTKVYNRSSFTERLEHEYRRWIRTQHNLRVVLFDIDKFKSINDS 412
           Y+R+LE   + A  D LT   NR  F E       +   +Q ++ ++L DID FK +NDS
Sbjct: 316 YQRKLE---IMASTDKLTGAANRQVFEEYFHQALDKAKLSQTSISILLIDIDHFKKVNDS 372

Query: 413 FGYTAGDKALSIIARTIKKELRDSDTVARFSGEEFILLLPERSDNESYQIIHQIQLNVSK 472
           +G++ GD  L  +   ++ +L+  D + R+ GEEF++LLPE   + + ++  + + ++S+
Sbjct: 373 YGHSVGDLVLKTVTNLLRSQLKPQDILCRWGGEEFLVLLPEMDLSRAAELAERFRDSISQ 432

Query: 473 LPFKFRDKSLTITLSAASIRFMDSDTPETVLDRLNLTLSEAKHIGPSQLV 522
              K     + IT+S     +   +  E ++ R +L L +AK  G +Q+V
Sbjct: 433 RELKVNGVHIAITVSIGVAEYQKLEPAEDLIKRADLALYQAKEAGRNQVV 482