Pairwise Alignments

Query, 524 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 86.3 bits (212), Expect = 3e-21
 Identities = 52/165 (31%), Positives = 86/165 (52%), Gaps = 5/165 (3%)

Query: 363 RAQLDPLTKVYNRSSFTERLEHEYRRWIRTQHNLRVVLFDIDKFKSINDSFGYTAGDKAL 422
           RA +DPLT + NR+ F E L  E +R  R    L +++FD D FK  ND +G+ AGD  L
Sbjct: 308 RAGIDPLTGLCNRARFDEVLLAELQRLQRQDSPLSLMMFDADHFKPYNDMYGHVAGDACL 367

Query: 423 SIIARTIKKEL-RDSDTVARFSGEEFILLLPERSDNESYQIIHQIQLNVSKLPFKFRDKS 481
             +A  ++    R SD VAR+ GEEF+ +LP    + +Y +  +++  V  L        
Sbjct: 368 KRVAGVLRAVAHRASDVVARYGGEEFVCILPGTDRDSAYALAEKVRQGVRALAIPHVGSP 427

Query: 482 ----LTITLSAASIRFMDSDTPETVLDRLNLTLSEAKHIGPSQLV 522
               LT++    ++   D   P+ V+ +++  L +AK  G  +++
Sbjct: 428 VAGVLTVSAGVVTVHGCDGLDPQEVVAQVDRALYQAKGAGRDRVM 472