Pairwise Alignments

Query, 524 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  102 bits (255), Expect = 2e-26
 Identities = 80/299 (26%), Positives = 148/299 (49%), Gaps = 24/299 (8%)

Query: 231 LRLVVDGSHAERKAAEAFLEQVNLSIGNNLKSATQNLEQSQSYMAHRQ-EMNGELSSLVA 289
           L   +DG  A +     F ++VN S+  N        E+S   + + Q E    ++SL++
Sbjct: 50  LNRAIDGFLANKVV---FTKEVNTSLYKNFIQ-----EKSPEVIENVQIETQILINSLIS 101

Query: 290 RSQTALKEQTELEQ-------LKLKMAPLLREMSSLSERLLLAEQREQALLERMRYSKDQ 342
           +  T L + TE          L+L+  P +  ++ L + ++      Q+LL   +  +  
Sbjct: 102 KI-TQLNQGTEAFSSTLADFGLQLQTKPDVCTLNQLVDGVI---DEMQSLLVNNQTMEQS 157

Query: 343 MEALSDLAQDYRRRLEDQALRAQLDPLTKVYNRSSFTERLEHEYRRWIRTQHNLRVVLFD 402
           + A+    Q+ +  +E+ +L A  D LT ++NR ++   ++    R  +      ++L D
Sbjct: 158 LSAMGQEVQNLKTEMENLSLAAMTDQLTSLHNRRAYEIAIQDHIHRAEQQHTRCSLLLID 217

Query: 403 IDKFKSINDSFGYTAGDKALSIIARTIKKELRDSDTVARFSGEEFILLLPERSDNESYQI 462
           ID+FK  ND++G+  GDK L+ +A  +K+ +R  D VAR+ GEEF++LLP    +++ Q+
Sbjct: 218 IDRFKVFNDNYGHQVGDKVLAYVALALKQCVRGDDFVARYGGEEFVVLLPNTHFHDALQV 277

Query: 463 IHQIQLNVSKLPFKF-RDKSLT---ITLSAASIRFMDSDTPETVLDRLNLTLSEAKHIG 517
              ++  +S+      +DK L+   IT+S       + D  +T+  R +  L EAK  G
Sbjct: 278 AETLRERISERRLAIGKDKKLSLGAITVSIGLASLQEGDDADTLFSRADKALYEAKSDG 336