Pairwise Alignments

Query, 457 a.a., LOG family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  632 bits (1629), Expect = 0.0
 Identities = 311/451 (68%), Positives = 366/451 (81%), Gaps = 1/451 (0%)

Query: 6   MIIQVSPAGSMDLLSQLEVERLKKTASSDLYQLYRNCSLAVLNSGSHTDNSKELLDKYKN 65
           MI++VSP GSMD LSQLEV+RLKK+A S LYQLYRNCSLAVL +G  TDNSK L ++Y +
Sbjct: 1   MIVKVSPKGSMDQLSQLEVDRLKKSAQSALYQLYRNCSLAVLAAGLKTDNSKALFEQYSD 60

Query: 66  FDITVMRRERGIKLELANPPEHAFVDGQIIKGIQEHLFSVLRDIVYVNMHLADSQRLNLT 125
           FDI V++RERG+KLEL NPPE AFVDGQII GIQEHLFSVLRDI+Y++      + +NLT
Sbjct: 61  FDIHVLQRERGVKLELINPPEQAFVDGQIITGIQEHLFSVLRDILYISDKYDTLKHINLT 120

Query: 126 NATHITNLVFGILRNAGALIPGATPNLVVCWGGHSINEVEYQYTREVGHELGLRELNICT 185
           NA+HITN+VF ILRNA A+ P   PN+VVCWGGHSIN +EYQYTREVG++LGLREL+ICT
Sbjct: 121 NASHITNVVFDILRNARAIAPMKDPNVVVCWGGHSINAIEYQYTREVGYQLGLRELDICT 180

Query: 186 GCGPGAMEGPMKGAAVGHAKQRYSEYRYLGLTEPSIIAAEPPNPIVNELVIMPDIEKRLE 245
           GCGPGAMEGPMKGAA+GH+KQR    RY+GLTEPSIIAAEPPN IVNELVI+PDIEKRLE
Sbjct: 181 GCGPGAMEGPMKGAAIGHSKQRIKNARYIGLTEPSIIAAEPPNQIVNELVILPDIEKRLE 240

Query: 246 AFVRMAHGIIIFPGGPGTAEELLYILGIMMHPENADQPMPIVLTGPKQSEAYFRSLDKFI 305
           AFVR+ HGIIIFPGG GTAEELLYILGI+++ EN + P P+VLTGP +S  YF  +D+FI
Sbjct: 241 AFVRLGHGIIIFPGGAGTAEELLYILGILLNKENQETPFPLVLTGPSESADYFIKIDEFI 300

Query: 306 TDTLGEAARKHYSIAIDNPAEAARIMSNAMPLVRQHRKDKEDAYSFNWSLKIEPEFQLPF 365
             TLG  A++ Y I IDNPAE AR+M   M  V+ HR+   DAY + W LKIEPEFQLPF
Sbjct: 301 AATLGPEAQQKYQIIIDNPAEVARVMKQGMEQVKNHRRTTGDAYQYQWGLKIEPEFQLPF 360

Query: 366 EPNHESMANLDLHLNQRPEVLAANLRRAFSGVVAGNVKAEGIREIERHGPFEMHGDPVLM 425
            P H+ MANL+LH       LAANLR+AFSG+VAGNVK+E I++IE+ GPF + GDP LM
Sbjct: 361 IPTHDVMANLNLHFQSNKAELAANLRKAFSGIVAGNVKSETIKQIEQLGPFHIKGDPHLM 420

Query: 426 KKMDQLLNDFVAQNRMKLPGGSAYEPCYKIV 456
           + MD LL  FVAQ+RMKLP GSAY PCY+IV
Sbjct: 421 ELMDNLLGAFVAQHRMKLP-GSAYVPCYQIV 450