Pairwise Alignments

Query, 283 a.a., flap endonuclease Xni from Vibrio cholerae E7946 ATCC 55056

Subject, 1004 a.a., DNA polymerase I from Sinorhizobium meliloti 1021

 Score =  115 bits (289), Expect = 3e-30
 Identities = 76/266 (28%), Positives = 131/266 (49%), Gaps = 16/266 (6%)

Query: 28  HLVIIDALNLIRRVHSAQPDPNDITRTAETTT-----RTLQRIINEAQ-------PSHMI 75
           HL ++D    I R   A P  N  +              L +++ +A+       P+H+ 
Sbjct: 6   HLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVAGFCNMLWKLLTDARDTSVGVTPTHLA 65

Query: 76  AVFDHHLSDRGWRAELLPTYKANRKPMPDVLQQGIDAIQDAWWQLGIDSLLSEGDEADDL 135
            +FD+  S + +R  L   YKANR   P+ L      I+ A     +  +  EG EADDL
Sbjct: 66  VIFDY--SSKTFRNGLYDQYKANRTAPPEDLIPQFGLIRHATRAFNLPCIEKEGYEADDL 123

Query: 136 VATLACKVAAHQEKVTIISTDKGYCQLLSPTLQIRDYFQQRWLDEPFIAQEFGVTPAQLT 195
           +AT A         VTI+S+DK   QL++P + + D  + + +  P + +++GV P ++ 
Sbjct: 124 IATYARLAEEAGADVTIVSSDKDLMQLVTPKVSMYDSMKDKQITVPDVIEKWGVPPEKMI 183

Query: 196 DYWGLTGVSSSQIPGVAGIGPKAAKEILNQFSSIEE--AYASPELPAKYRKKLDPHIEMA 253
           D   +TG S+  +PG+ GIGPK A ++L ++  ++   A A      K R+ +  + ++A
Sbjct: 184 DLQAMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLDTLLARAGEIKQQKRRESIIANADLA 243

Query: 254 RICKQVSALKTDIELGFNLQDIRFNS 279
           R+ +++  LK D  L    +D R +S
Sbjct: 244 RLSRELVTLKKDTPLDVPPEDFRLDS 269