Pairwise Alignments

Query, 283 a.a., flap endonuclease Xni from Vibrio cholerae E7946 ATCC 55056

Subject, 924 a.a., DNA polymerase A (NCBI) from Rhodospirillum rubrum S1H

 Score =  117 bits (292), Expect = 1e-30
 Identities = 78/256 (30%), Positives = 127/256 (49%), Gaps = 14/256 (5%)

Query: 28  HLVIIDALNLIRRVHSAQPDPNDITRTAETT-------TRTLQRIINEAQPSHMIAVFDH 80
           HL ++D    I R + + P    +TRT  T        T  L +++ +    H+  +FD 
Sbjct: 6   HLYLVDGSGYIFRAYHSLPP---MTRTDGTPVNAVYGFTAMLMKLLADMDADHLAVIFDK 62

Query: 81  HLSDRGWRAELLPTYKANRKPMPDVLQQGIDAIQDAWWQLGIDSLLSEGDEADDLVATLA 140
             +   +R E+ P YKA R P P+ L      I++A     +  +  +G EADDL+AT A
Sbjct: 63  --ARVSFRNEIYPLYKAQRPPPPEDLIPQFPLIREAVRAFNVPCIERDGFEADDLIATYA 120

Query: 141 CKVAAHQEKVTIISTDKGYCQLLSPTLQIRDYFQQRWLDEPFIAQEFGVTPAQLTDYWGL 200
            +  A    VT++S+DK   QL+   + + D  + R +    + ++FGV P ++ D   L
Sbjct: 121 KRARAEGAIVTVVSSDKDLMQLVGEGVALFDPMKNRAIGPAEVFEKFGVAPDKVIDVQAL 180

Query: 201 TGVSSSQIPGVAGIGPKAAKEILNQFSSIEE--AYASPELPAKYRKKLDPHIEMARICKQ 258
            G +   +PGV GIG K A +++ ++  +E   A A+     K R+ L  H E ARI  Q
Sbjct: 181 AGDAVDNVPGVPGIGVKTAAQLIGEYGDLETLLARAAEIKQPKRRQSLLDHAEAARISLQ 240

Query: 259 VSALKTDIELGFNLQD 274
           +  L+ D+E+   L D
Sbjct: 241 LVRLRDDVEVSETLAD 256