Pairwise Alignments

Query, 283 a.a., flap endonuclease Xni from Vibrio cholerae E7946 ATCC 55056

Subject, 937 a.a., DNA polymerase I from Phaeobacter inhibens DSM 17395

 Score =  115 bits (287), Expect = 5e-30
 Identities = 82/270 (30%), Positives = 129/270 (47%), Gaps = 19/270 (7%)

Query: 28  HLVIIDALNLIRRVHSAQPDPNDITRTAETTT------------RTLQRIINEAQPSHMI 75
           HL +ID    I R + A P    +TR ++               R ++       P+H+ 
Sbjct: 11  HLHLIDGSAFIFRAYHALPP---LTRKSDGLPIGAVAGFCNMLHRYVEGNTGPDAPTHVA 67

Query: 76  AVFDHHLSDRGWRAELLPTYKANRKPMPDVLQQGIDAIQDAWWQLGIDSLLSEGDEADDL 135
            +FD       +R +L   YKANR+ MP+ L+  I   + A     I     EG EADD+
Sbjct: 68  VIFDK--GSHTFRNDLYDQYKANREAMPEDLRPQIPLTRTATEAFNIACKEQEGFEADDI 125

Query: 136 VATLACKVAAHQEKVTIISTDKGYCQLLSPTLQIRDYFQQRWLDEPFIAQEFGVTPAQLT 195
           +ATLAC+      +VTIIS+DK   QL+   +++ D  + + +D   + ++FGV P ++ 
Sbjct: 126 IATLACQARDAGGRVTIISSDKDLMQLVGGGVEMLDAMKNKRIDTDGVFEKFGVGPDRVV 185

Query: 196 DYWGLTGVSSSQIPGVAGIGPKAAKEILNQFSSIEEAYASPE--LPAKYRKKLDPHIEMA 253
           D   L G S   +PG  GIG K A  ++N++ S+E+     E     K R+ L  +    
Sbjct: 186 DVQALAGDSVDNVPGAPGIGIKTAALLINEYGSLEDLLNRAEEIKQPKRRQTLIENRAQI 245

Query: 254 RICKQVSALKTDIELGFNLQDIRFNSSSAD 283
            + KQ+  L  ++EL F L D+      AD
Sbjct: 246 ELSKQLVQLDNNMELDFTLDDLGVRDPDAD 275