Pairwise Alignments

Query, 283 a.a., flap endonuclease Xni from Vibrio cholerae E7946 ATCC 55056

Subject, 872 a.a., DNA polymerase I (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  113 bits (282), Expect = 2e-29
 Identities = 72/210 (34%), Positives = 113/210 (53%), Gaps = 6/210 (2%)

Query: 59  TRTLQRIINEAQPSHMIAVFDHHLSDRGWRAELLPTYKANRKPMPDVLQQGIDAIQDAWW 118
           TR L R++ E +P++   V D       +R EL P YK  R   P+ L Q +D I+    
Sbjct: 48  TRILLRLLREERPTNFCFVLDG--KGPTFRHELFPPYKMQRAVTPEPLVQQLDPIKRMVR 105

Query: 119 QLGIDSLLSEGDEADDLVATLACKVAAHQEKVTIISTDKGYCQLLSPTLQIRDYF--QQR 176
            LG+  ++S+G EADD +A+LA +  + +  V I+ TDK   Q L   + + D    +++
Sbjct: 106 ALGLPLVVSDGCEADDCIASLAARHRS-ERPVVIVGTDKDLKQCLHDNVVLWDPAAKEEK 164

Query: 177 WLDEPFIAQEFGVTPAQLTDYWGLTGVSSSQIPGVAGIGPKAAKEILNQFSSIEEAY-AS 235
            +       E G+ PA+  D+  + G SS  IPG+ G+GPK A++I   F S+E+     
Sbjct: 165 LVTLADFTAETGLAPARWPDFQAVIGDSSDNIPGIPGVGPKTAEKIFKDFGSLEDIRDRV 224

Query: 236 PELPAKYRKKLDPHIEMARICKQVSALKTD 265
            ELP K R K +PH+E   + +Q++ L TD
Sbjct: 225 GELPEKLRAKFEPHLETMFLYRQLTTLTTD 254