Pairwise Alignments

Query, 283 a.a., flap endonuclease Xni from Vibrio cholerae E7946 ATCC 55056

Subject, 922 a.a., DNA polymerase I (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  109 bits (272), Expect = 3e-28
 Identities = 69/252 (27%), Positives = 122/252 (48%), Gaps = 14/252 (5%)

Query: 29  LVIIDALNLIRRVHSAQP----DPNDITRTAETTTRTLQRIINEAQPSHMIAVFDHHLSD 84
           LV++D  + + R + A P       + T         L+ +++  QPSH+  VFD     
Sbjct: 9   LVLVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVVNMLRSLLSRYQPSHIAVVFD--AKG 66

Query: 85  RGWRAELLPTYKANRKPMPDVLQQGIDAIQDAWWQLGIDSLLSEGDEADDLVATLACKVA 144
           + +R +L   YKA+R PMPD L+  I+ +      LG+  +   G EADD++ T+A + +
Sbjct: 67  KTFRNDLYQEYKAHRPPMPDDLRSQIEPLHRIIRALGLPLISIPGVEADDVIGTIARRAS 126

Query: 145 AHQEKVTIISTDKGYCQLLSPTLQIRDYFQQRWLDEPFIAQEFGVTPAQLTDYWGLTGVS 204
                V I + DK   QL+   + + +      +    +A ++GV P ++ D+  L G  
Sbjct: 127 RENRAVLISTGDKDMAQLVDENITLINTMTDTIMGPEEVAAKYGVGPDRIIDFLALMGDK 186

Query: 205 SSQIPGVAGIGPKAAKEILNQFSSIEEAYASPELPAK--------YRKKLDPHIEMARIC 256
           +  IPG+ G+G K A  +L    S+    A PE  ++           K+  + +M R+ 
Sbjct: 187 ADNIPGLPGVGEKTALAMLTGAGSVANLLAEPEKVSELAFRGSKTMAAKIIDNADMLRLS 246

Query: 257 KQVSALKTDIEL 268
            +++ +KTD+EL
Sbjct: 247 YELATIKTDVEL 258