Pairwise Alignments

Query, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., Glycine cleavage system transcriptional activator GcvA from Pseudomonas fluorescens FW300-N2E2

 Score =  189 bits (479), Expect = 9e-53
 Identities = 110/300 (36%), Positives = 169/300 (56%), Gaps = 18/300 (6%)

Query: 8   LNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRS---LLLTE 64
           LN+L+ FEAAARH SF+ AA EL VT AAV  Q++ LE +LG+ LF R +     L+LT+
Sbjct: 7   LNALRAFEAAARHQSFSAAAAELNVTPAAVGQQVRNLESWLGISLFTRASSGTARLMLTD 66

Query: 65  EGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQEPDID 124
             +    DI++ F  L+    +L + S    LT+++ P+FA +WL+PR+  F Q  PD+D
Sbjct: 67  VARVALPDIREGFDRLSIGLARLKDASVHAGLTVTVSPAFASKWLLPRIERFQQDHPDLD 126

Query: 125 VRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLL---GNKPME 181
           V +           + +DV + YG G WPGL A  L  E + P+C+P   L   G    E
Sbjct: 127 VLLDTNARSVDFQVERIDVGVRYGAGKWPGLIAVHLMDEVMFPVCAPDFPLLKDGKLIAE 186

Query: 182 KLSDLAYHTLLHDTSRKD------WKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQG 235
            L+D    TL+HD S  +      W+ +   +G  ++  +HG   ++S  VLQAA  GQG
Sbjct: 187 ALADC---TLIHDLSMANDRDYPTWRMWLDASGFTHIKSDHGLRINNSASVLQAAIDGQG 243

Query: 236 VALGNNVLAQPEIDAGRLIAPFDEVLM---TNNAFYVVCHEKQADMGRIATFRDWMLKKA 292
           +AL  +V+ + ++  GRLI PF +  +      A+YVV   + +++ +I  FRDW++ +A
Sbjct: 244 LALARSVMVRDDLSTGRLIRPFADKGLDCPLTQAYYVVYRAECSELPKIQAFRDWLIAEA 303