Pairwise Alignments

Query, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  185 bits (469), Expect = 1e-51
 Identities = 107/292 (36%), Positives = 168/292 (57%), Gaps = 7/292 (2%)

Query: 3   RRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLLL 62
           + LPPLN L+ FE +AR L+FT AA+ELF+TQ AVS QI+ LE  LG+ LF+R  R L L
Sbjct: 4   KTLPPLNWLRAFEVSARCLNFTHAADELFLTQGAVSQQIRQLESHLGVALFKRLPRGLGL 63

Query: 63  TEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQEPD 122
           TEEGQ+Y   ++D  + LA  T+++  + ++  + +    +F + WL P+L DF Q  P 
Sbjct: 64  TEEGQAYLPVVQDAITRLAVGTNEIFGQHKRRPIKVRGSLAFFVHWLAPKLVDFRQVHPH 123

Query: 123 IDVR-IKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPME 181
           +D+R I  + + E  L  + D+ I +G G WPGL + +L  + L P+CSPAL+     ++
Sbjct: 124 VDIRYISNIWVKE--LDGEDDMEIRWGHGQWPGLVSQRLTWDTLFPVCSPALM---TTLK 178

Query: 182 KLSDLAYHTLLHDTSRKD-WKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQGVALGN 240
             +D+A H LLH    ++ W  + K  G D+V+ + G  F      L+ A  GQG+AL  
Sbjct: 179 VPADVAKHPLLHVLGYEEGWGYWLKMVGADSVDSSTGMQFDTLVCTLRMAELGQGIALAR 238

Query: 241 NVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKKA 292
           + +    +  GRL+ PF + +  + +FY+V           A F  W++++A
Sbjct: 239 SSMVSDMLGDGRLVEPFAQRIEASESFYLVRSSGAEQHPDAARFSTWLVEQA 290