Pairwise Alignments

Query, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., Glycine cleavage system transcriptional activator GcvA from Pseudomonas fluorescens FW300-N2E2

 Score =  231 bits (588), Expect = 2e-65
 Identities = 129/292 (44%), Positives = 170/292 (58%), Gaps = 3/292 (1%)

Query: 1   MSRRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSL 60
           M+ R+P LN LK FE+AARH+SFT+AA+EL VTQ A+SHQI+ LEE LG++LF R    L
Sbjct: 1   MAIRIPSLNGLKAFESAARHMSFTKAAQELNVTQTAISHQIRRLEEELGVRLFLRLKDGL 60

Query: 61  LLTEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQE 120
            LT+EG +YF  ++  F  L   T  LL+      LTIS   SFA +WL+PRLA F Q  
Sbjct: 61  ALTDEGHAYFPGVRAAFHELRYCTQTLLQSRSNSVLTISTLVSFASKWLLPRLASFQQAF 120

Query: 121 PDIDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPM 180
           P+IDVR+ A           VD AI YG G W GLRAD L  + + P+CSP LL G K +
Sbjct: 121 PNIDVRVTASTERVNFREGGVDAAIRYGSGDWKGLRADWLMADEIFPVCSPRLLQGPKVL 180

Query: 181 EKLSDLAYHTLLH--DTSRKDWKQFAKENGLDNVNVNHGPI-FSHSTMVLQAAAHGQGVA 237
           E   DLA HTLL     +R DW  +    G          + F  + M +QAA  G GV 
Sbjct: 181 ENPRDLARHTLLQVSGVTRDDWSAWLSAAGQPKKLAEGSRLTFDLAMMAVQAAVDGLGVC 240

Query: 238 LGNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWML 289
           +G +   + ++ AGRL+APFD  L ++  FY V   + AD  ++  FR W++
Sbjct: 241 IGRSTYVEDDLKAGRLVAPFDLRLKSDLGFYFVSPHETADTPKVQAFRTWLM 292