Pairwise Alignments

Query, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., transcriptional Regulator LysR family; putative Glycine cleavage system transcriptional activator (Gcv operon activator) from Azospirillum brasilense Sp245

 Score =  197 bits (502), Expect = 2e-55
 Identities = 118/294 (40%), Positives = 168/294 (57%), Gaps = 10/294 (3%)

Query: 1   MSRRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSL 60
           M+ RLPPLN+L++FEAA RH SF  AAEEL +T +AVSH I+ LE++LG++LF R NRSL
Sbjct: 1   MAYRLPPLNTLRLFEAAGRHQSFKAAAEELHLTPSAVSHGIQTLEDWLGVELFLRGNRSL 60

Query: 61  LLTEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQE 120
            LT  GQ+Y   ++D   SLA AT+ +  R+  G L++S  P+FA++WL+PRL  F ++ 
Sbjct: 61  SLTPAGQTYLPRVRDALQSLALATESVPGRAPSGRLSVSAAPTFALRWLIPRLPAFQERH 120

Query: 121 PDIDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPM 180
           P I V +           D +DV I  GRG WPGL A KL +E L+P+ +PAL      +
Sbjct: 121 PAITVALDTAHRVVEFPRDGIDVGIRLGRGDWPGLAALKLMEEDLVPVAAPALA---ARI 177

Query: 181 EKLSDLAYHTLLH--DTSRKDWKQFAKENGLD----NVNVNHGPIFSHSTMVLQAAAHGQ 234
              +DLA   LLH  D S +DW  +A+  GL     +  +  G       M + AA  G 
Sbjct: 178 ACPADLATVPLLHVADVS-EDWTAWAEAAGLPPSALDDGLKRGLRLDAIHMAVDAAVRGL 236

Query: 235 GVALGNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWM 288
           GV +G      PE+ +G+L+      L   +A+++V  +       +A FR WM
Sbjct: 237 GVIIGRRPTIDPELASGQLVEVMGPRLRAKSAYWLVTAQDSLRRPEVAAFRSWM 290