Pairwise Alignments

Query, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., glycine cleavage system transcriptional activator, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  428 bits (1100), Expect = e-125
 Identities = 209/299 (69%), Positives = 255/299 (85%), Gaps = 4/299 (1%)

Query: 1   MSRRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSL 60
           MSRRLPPLN++K FEAAARHLSFTRAAEELFVTQAAVSHQIKALE+FLGLKLFRR+NRSL
Sbjct: 1   MSRRLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSL 60

Query: 61  LLTEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQE 120
           LLTEEGQSYFLDIKDIF  LA+ATD+LL RS  G+LT+S+ PSFAIQWLVPRL+ F+++ 
Sbjct: 61  LLTEEGQSYFLDIKDIFIQLADATDRLLARSAIGSLTVSMSPSFAIQWLVPRLSKFSEKN 120

Query: 121 PDIDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPM 180
           P+IDVRIKAVD +  SLTDDVDVAIYYG G+WPGLRADKL  E LIP+CSP LL G KP+
Sbjct: 121 PEIDVRIKAVDTEASSLTDDVDVAIYYGLGNWPGLRADKLRNEVLIPVCSPMLLNGPKPL 180

Query: 181 EKLSDLAYHTLLHDTSRKDWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQGVALGN 240
            K  DL +HTLLHD SR DW+ + ++ G+ ++NVN GPIFSHS++VLQAAAHGQGVALG 
Sbjct: 181 SKPEDLKHHTLLHDMSRHDWQAWFRQCGITDINVNQGPIFSHSSLVLQAAAHGQGVALGY 240

Query: 241 NVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWML----KKARSE 295
           +VLA+P+I AGRL+ PF EVL++ +A+Y+VC +  A++G++  FR+WML    +++RSE
Sbjct: 241 SVLARPDIKAGRLVCPFQEVLVSKDAYYLVCQQNHAELGKVVAFREWMLDMFAEESRSE 299