Pairwise Alignments

Query, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., transcriptional regulator, LysR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  193 bits (490), Expect = 5e-54
 Identities = 119/297 (40%), Positives = 161/297 (54%), Gaps = 4/297 (1%)

Query: 1   MSRRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSL 60
           M   LPPLN+L  FEAAAR  S TRAA EL VTQAAVS Q++ LE  LGL LF R  + L
Sbjct: 1   MKDGLPPLNALVAFEAAARLGSITRAARELCVTQAAVSQQVRRLEGHLGLALFARGGQGL 60

Query: 61  LLTEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQE 120
            LT+EG+ Y   I    +S+  ATD L+     G LT+   PSFA +W+VPR   F ++ 
Sbjct: 61  RLTDEGRRYLDGIAGPLASIRRATDALMAEDTSGVLTVIAAPSFANRWIVPRFNRFYERH 120

Query: 121 PDIDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPM 180
           PDID+RI    +    L   VD+ IY+  G  PG  +  L  E + P+CSP LL  N   
Sbjct: 121 PDIDLRIGPAPV-APELGRGVDIIIYHDIGDRPGTYSMPLMGERIFPVCSPELLDANGG- 178

Query: 181 EKLSDLAYHTLLHDT--SRKDWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQGVAL 238
           E  S L    LL         W+ + ++ GL +  +  GP F  S + L AA  G GVAL
Sbjct: 179 EAASFLRGQLLLRHARDGMGLWEAWLEKAGLGDEGLRFGPRFDFSYLALAAALDGAGVAL 238

Query: 239 GNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKKARSE 295
           G  +L   ++ AGRL  P    ++    ++  C E  A+  R+A FR+W++ + R +
Sbjct: 239 GRTLLVAEDLAAGRLCVPVPLTMVAPRPYWFCCAEAHAERPRVAAFREWLVDEMRRD 295