Pairwise Alignments

Query, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., LysR-family transcriptional regulator from Caulobacter crescentus NA1000

 Score =  229 bits (585), Expect = 5e-65
 Identities = 124/300 (41%), Positives = 184/300 (61%), Gaps = 7/300 (2%)

Query: 3   RRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLLL 62
           RRLPPLN+L+ FEAAARHL+F+RAA+EL VT  AVS QI+ LE+++G  LF+R  + LLL
Sbjct: 8   RRLPPLNALRAFEAAARHLNFSRAADELSVTPGAVSQQIQNLEDYVGAALFKRTPKGLLL 67

Query: 63  TEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQEPD 122
           T+  Q+    +++ F  LAEA   L    +   LT++  PSFA +WLVPRL  F Q  P 
Sbjct: 68  TDAAQTALPALREAFDRLAEAASLLTAAVDGRRLTLTAAPSFAAKWLVPRLGKFEQAHPQ 127

Query: 123 IDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPMEK 182
           +DV + A        T +VD+AI YG G +PGL   +L  E ++P+ SP LL  N  +E+
Sbjct: 128 VDVWLSAGMEVVDFATGEVDMAIRYGSGRYPGLEVIRLLHETVVPVASPELLEQN-ALER 186

Query: 183 LSDLAYHTLLH------DTSRKDWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQGV 236
             DL +H LLH      D S  DW  +    G+  V+   GP F+ S++V++AAA+G+G+
Sbjct: 187 PEDLQHHILLHDGSPDADDSCPDWAMWLAARGIRGVDGARGPRFNQSSLVIEAAANGRGI 246

Query: 237 ALGNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKKARSEQ 296
           AL    LAQ ++D+GRL+ PF+     + A+YVV  + +  + ++  F +W+  +A + +
Sbjct: 247 ALAKRTLAQADLDSGRLVIPFEASTAVDFAYYVVHPKAKGRLPQVKAFVNWLKAEAEAHE 306