Pairwise Alignments

Query, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., XRE family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  201 bits (510), Expect = 2e-56
 Identities = 115/290 (39%), Positives = 166/290 (57%), Gaps = 3/290 (1%)

Query: 3   RRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLLL 62
           R+LP LN++K FEAAARH SF+RAA+ELFVT  AVSHQI+ALE  LG+ LF R  + + L
Sbjct: 4   RQLPALNAIKAFEAAARHESFSRAADELFVTHGAVSHQIRALEADLGVSLFARDGKRVRL 63

Query: 63  TEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQEPD 122
           TE G+ Y   ++    +LA+AT ++     +  L +S+  SFA +W+ PR+  F +  P 
Sbjct: 64  TETGRRYATHVRSALMALADATREIRAGDRERRLVVSMLSSFAARWVTPRVGSFIEAHPQ 123

Query: 123 IDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPMEK 182
            D+ + + +       DDVDVAI +G G +PGL ++ L +E   P C+P    G  P + 
Sbjct: 124 WDLELLSTNALTDFARDDVDVAIRFGFGKYPGLHSELLLEEIFFPACAPNFNGGKLP-QT 182

Query: 183 LSDLAYHTLLHDTSRKDWKQFAKENGLDN-VNVNHGPIFSHSTMVLQAAAHGQGVALGNN 241
            +DLA  TLL       W+ +    GL        G ++  S+ +LQAA  GQGVAL   
Sbjct: 183 PADLAKVTLLRSDDEL-WRPWFDAAGLTEWPEPKRGVLYQDSSNLLQAAIDGQGVALTRR 241

Query: 242 VLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKK 291
            LA PEI AGRL+  FD    +   +Y +C  +  +  R+  FRDW+ ++
Sbjct: 242 SLAMPEIAAGRLVRLFDVDGPSPWQYYFICTPQMLETARVKAFRDWVFEE 291