Pairwise Alignments

Query, 483 a.a., tRNA 4-thiouridine(8) synthase ThiI from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., thiamine biosynthesis protein ThiI (RefSeq) from Shewanella loihica PV-4

 Score =  570 bits (1470), Expect = e-167
 Identities = 303/485 (62%), Positives = 362/485 (74%), Gaps = 3/485 (0%)

Query: 1   MKFIVKPHPEIFVKSESVRKRFTKILESNIRIIVKARTQGVAVFNRRDHIEVTSNSDT-- 58
           MKFIVK  PEI +KS+ VR RFTK+LE+NIR +++   +   V  + D I V    D   
Sbjct: 1   MKFIVKLFPEIMMKSKPVRMRFTKMLETNIRNVLRKVDEEARVQRQWDKIMVRVPEDKPE 60

Query: 59  YYAEVLEILTTTPGIQQVLEVQQSSFTDLHNIYEQVLELNRANLENKTFVVRAKRRGKHD 118
                 E L   PGI  VL+V++S+F  + +IY+Q L L +  L  KTF VR KR GKH+
Sbjct: 61  MIERYAERLACIPGIAHVLQVRESTFESVDDIYQQTLALYKEELAGKTFCVRVKRSGKHE 120

Query: 119 FTSIELERYVGGGLNQAIASAKVKLINPDVTVQVEVVDELLNQVIARHKGLGGFPLGTQE 178
           F SIE+ERYVGGGLNQ   +A V+L NPD+TV +E+ +E L  V  R  GLGGFP+ TQE
Sbjct: 121 FNSIEVERYVGGGLNQFTEAAGVRLKNPDMTVNLEIDNEHLYLVEKRIDGLGGFPMATQE 180

Query: 179 DVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKVR 238
           DVLSLISGGFDSGVSS+  IKRGS+ HYCFFNLGG  HEIGVKQ AY+LWQKYG S KV+
Sbjct: 181 DVLSLISGGFDSGVSSFQFIKRGSRTHYCFFNLGGDQHEIGVKQVAYHLWQKYGESHKVK 240

Query: 239 FIAIDFAPVVAEILEKIDDGQMGVVLKRMFMRTAGMVAEKFGIQALVTGEALGQVSSQTL 298
           FI++ F PVV EILEKID+GQMGV+LKRM MR A  +AEK GIQALVTGEA+GQVSSQTL
Sbjct: 241 FISVPFDPVVQEILEKIDNGQMGVILKRMMMRAASRIAEKMGIQALVTGEAMGQVSSQTL 300

Query: 299 TNLRHIDNVTDTLILRPLINWDKEDIIRLAREIGTEDFAKTMPEFCGVISKSPTVKAVKE 358
           TNL  ID  TD LILRPLI  DK+DII ++REIGTEDFAK++PE+CGVIS+ PTVKAV  
Sbjct: 301 TNLNVIDRSTDMLILRPLIVMDKQDIINMSREIGTEDFAKSIPEYCGVISQKPTVKAVMG 360

Query: 359 KLEEEEAKFDFALLDQVVYNARQIDIRDIGKESLEKAPEVELVNSAEEGNAVVLDIRSPD 418
           K+  EE KF   L+D+VV  A  IDIRDI      K  E E V+ A  G  VV+DIRSP+
Sbjct: 361 KILAEEEKFSEDLIDRVVEAAEVIDIRDIAVSMDTKITETETVD-AVSGGEVVVDIRSPE 419

Query: 419 EEDESPLEIVGVEVKHLPFYKLATQFGDLDQSKTYLLYCSRGVMSRLQALYLQEQGFNNV 478
           EE++SPL + G+EVK +PF+KLATQF DLD+ KTYLLYC RGVMS+LQALYLQEQG++NV
Sbjct: 420 EEEQSPLSLNGIEVKCIPFFKLATQFADLDKEKTYLLYCDRGVMSKLQALYLQEQGYHNV 479

Query: 479 KVYRP 483
           KVYRP
Sbjct: 480 KVYRP 484