Pairwise Alignments

Query, 483 a.a., tRNA 4-thiouridine(8) synthase ThiI from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., tRNA 4-thiouridine(8) synthase ThiI from Methanococcus maripaludis S2

 Score =  152 bits (383), Expect = 3e-41
 Identities = 120/383 (31%), Positives = 190/383 (49%), Gaps = 37/383 (9%)

Query: 2   KFIVKPHPEIFVKSESVRKRFTKILESNIRIIVKAR--TQGVAVFNRRDHIEVTSNSDTY 59
           KFIV+ + EI  KS     RF K+L  NI  + K    +  V + + R  ++V   +   
Sbjct: 3   KFIVR-YGEIGTKSRQTMHRFEKLLAKNISKLAKKHGISAEVEIIHTRLIVDVPEEN--- 58

Query: 60  YAEVLEILTTTPGI-------------QQVLEVQQSSFTDLHNIYEQVLELNRANLENKT 106
           + ++ E+L   PGI             +Q+ ++    F      YE        N EN T
Sbjct: 59  FEKMKELLKKVPGIVSFSPCYYIDPDIEQIKKISSELFEKEIERYE--------NKENIT 110

Query: 107 FVVRAKR-RGKHDFTSIELERYVGGGLNQAIASAKVKLINPDVTVQVEVVDELLNQVIAR 165
           F V+ +R + K   TS+E+   VGG +++     KV L NP +++ +EV +E       R
Sbjct: 111 FRVKTQRPQKKFPLTSLEVNMEVGGPISEKYG-IKVDLKNPTISLDIEVFNEYAYVFAKR 169

Query: 166 HKGLGGFPLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAY 225
            +G+GG P+GTQ  V+ L+S G DS VS+Y+  KRG K+      L     + G+++T  
Sbjct: 170 IEGIGGIPVGTQGKVIVLLSDGIDSPVSAYMMAKRGCKL----LLLHMKTSDEGLEKTQK 225

Query: 226 YLWQKYGSSAKVRFIAIDF----APVVAEILEKIDDGQMGVVLKRMFMRTAGMVAEKFGI 281
            +        + +F+ +DF    A + AE+ E   D    +  K+  ++ A   A+    
Sbjct: 226 LVDVLSDFDPEAKFVYVDFNEELAKIKAELTEINRDKYTCLYCKKYMLKLAEKHAKWHKC 285

Query: 282 QALVTGEALGQVSSQTLTNLRHIDNVTDTLILRPLINWDKEDIIRLAREIGTEDFAKTMP 341
            A+V G+ +GQV+SQTL NLR I    D  ILRPLI  DK +I+ +AR+IGT D + +  
Sbjct: 286 DAIVNGDNMGQVASQTLKNLRVISEGIDYPILRPLIGLDKVEIMDIARKIGTFDISTSKE 345

Query: 342 EFCGVISKSPTVKAVKEKLEEEE 364
             C  + K P   A  +++E+ E
Sbjct: 346 VSCFAVPKHPITNATPDEMEKIE 368