Pairwise Alignments

Query, 483 a.a., tRNA 4-thiouridine(8) synthase ThiI from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., thiamine biosynthesis protein from Marinobacter adhaerens HP15

 Score =  377 bits (968), Expect = e-109
 Identities = 193/459 (42%), Positives = 290/459 (63%), Gaps = 3/459 (0%)

Query: 26  LESNIRIIVKARTQGVAVFNRRDHIEV-TSNSDTYYAEVLEILTTTPGIQQVLEVQQSSF 84
           L  NIR ++      + V    D ++V   +        LE+L   PGI  + E+    F
Sbjct: 4   LRQNIRKLLARLDPEIRVEGSWDRVDVEVPDGRGLSGPALELLLRIPGISTIQEIGAFPF 63

Query: 85  TDLHNIYEQVLELNRANLENKTFVVRAKRRGKHDFTSIELERYVGGGLNQAIASAKVKLI 144
             L ++ ++ +E     L  KTF VRA+R G+H F SI+LER VG  L QA  ++ V L 
Sbjct: 64  VSLEDVAKKAVEAFADRLTGKTFAVRARRHGEHSFRSIDLERTVGAALMQASGASGVDLK 123

Query: 145 NPDVTVQVEVVDELLNQVIARHKGLGGFPLGTQEDVLSLISGGFDSGVSSYLHIKRGSKV 204
           +P V V++EV D+  +    +H+GLGG+PLG+ E+VL+LISGG+DS V++YL ++RG + 
Sbjct: 124 SPQVEVRIEVQDDQFHIAHRKHRGLGGYPLGSVENVLTLISGGYDSSVAAYLMMRRGLRN 183

Query: 205 HYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKVRFIAIDFAPVVAEILEKIDDGQMGVVL 264
           H+ FFNLGG AHE+GV+Q  +YLW +YG+S   +FI++ F  VVAEI+  +     GVVL
Sbjct: 184 HFLFFNLGGTAHEVGVRQVVHYLWDRYGASHSAKFISVPFEGVVAEIMRSVSHRHWGVVL 243

Query: 265 KRMFMRTAGMVAEKFGIQALVTGEALGQVSSQTLTNLRHIDNVTDTLILRPLINWDKEDI 324
           KR  +  A  +A K     +VTG+A+ QVSSQTL+NL  +D  +D ++LRPL++ DKE I
Sbjct: 244 KRQMLMAAAEIARKNNASGVVTGDAVAQVSSQTLSNLNVVDRASDEVVLRPLVSMDKESI 303

Query: 325 IRLAREIGTEDFAKTMPEFCGVISKSPTVKAVKEKLEEEEAKFDFALLDQVVYNARQIDI 384
           IR+AREIGTE +A+ MPE+CGVIS+ P  +A   ++EE+E++ DF++L   +    +  +
Sbjct: 304 IRIAREIGTEVYARNMPEYCGVISQKPATRAKLHRVEEDESRMDFSVLASAIEAREETPV 363

Query: 385 RDIGKESLEKAPEVELVNSAEEGNAVVLDIRSPDEEDESPLEIVGVEVKHLPFYKLATQF 444
             +  E+     EVE+V +    + V++D+R P E ++SPL++   E+  +PFY+L  Q 
Sbjct: 364 NRL-LETTVTPEEVEMVQTPSVDD-VIIDVRHPSEGEQSPLKLTNNEILQIPFYELNQQL 421

Query: 445 GDLDQSKTYLLYCSRGVMSRLQALYLQEQGFNNVKVYRP 483
            +L  ++ YLLYC RG MSR+ A +L+ +G  NVKVY P
Sbjct: 422 PELPANRQYLLYCDRGTMSRMHAGHLRAEGHENVKVYAP 460