Pairwise Alignments

Query, 483 a.a., tRNA 4-thiouridine(8) synthase ThiI from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., thiamine biosynthesis protein ThiI (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  563 bits (1452), Expect = e-165
 Identities = 295/485 (60%), Positives = 359/485 (74%), Gaps = 3/485 (0%)

Query: 1   MKFIVKPHPEIFVKSESVRKRFTKILESNIRIIVKARTQGVAVFNRRDHIEVT--SNSDT 58
           MKFIVK +PEI +KS+ VR RFTK+LE+NIR ++K       V  + D I V    N   
Sbjct: 1   MKFIVKLYPEIMMKSKPVRMRFTKMLETNIRNVLKKVDDDAKVQRQWDRIMVMVPKNKPE 60

Query: 59  YYAEVLEILTTTPGIQQVLEVQQSSFTDLHNIYEQVLELNRANLENKTFVVRAKRRGKHD 118
                 E L   PGI  V++V + SFT + +IY+QVL + R  +  KTF VR KR G HD
Sbjct: 61  LAQAFGERLACIPGIAHVVQVDEYSFTSVDDIYQQVLPVYRDQIAGKTFCVRVKRTGSHD 120

Query: 119 FTSIELERYVGGGLNQAIASAKVKLINPDVTVQVEVVDELLNQVIARHKGLGGFPLGTQE 178
           F SIE+ERYVGGGLNQ   +  V+L NP+VTV +E+  + L  V  R +GLGGFP+ TQE
Sbjct: 121 FNSIEVERYVGGGLNQFTDAIGVRLKNPEVTVNLEIEGDKLYMVTKRIEGLGGFPMATQE 180

Query: 179 DVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKVR 238
           DVLSLISGGFDSGVSSY  IK+G++ HYCFFNLGG  HEIGVKQ AY+LW+ +G S KV+
Sbjct: 181 DVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGGAQHEIGVKQVAYHLWKTFGESHKVK 240

Query: 239 FIAIDFAPVVAEILEKIDDGQMGVVLKRMFMRTAGMVAEKFGIQALVTGEALGQVSSQTL 298
           F+++ F PVVAEILEKID+GQMGVVLKRM MRTA  +AE+ GIQA+VTGE+LGQVSSQTL
Sbjct: 241 FVSVPFEPVVAEILEKIDNGQMGVVLKRMMMRTAARIAERMGIQAIVTGESLGQVSSQTL 300

Query: 299 TNLRHIDNVTDTLILRPLINWDKEDIIRLAREIGTEDFAKTMPEFCGVISKSPTVKAVKE 358
           TNL  ID  TD LILRPLI  DK+DII   R IGTEDFAK+MPE+CGVIS+ PTVKAV  
Sbjct: 301 TNLNVIDRCTDMLILRPLITMDKQDIINECRRIGTEDFAKSMPEYCGVISQKPTVKAVLA 360

Query: 359 KLEEEEAKFDFALLDQVVYNARQIDIRDIGKESLEKAPEVELVNSAEEGNAVVLDIRSPD 418
           K+E EE KF   L+D++V  A  IDIR+I ++   +  E E V  A + N VV+DIR+P+
Sbjct: 361 KVEAEETKFSEDLIDRIVEQAVAIDIREIAEQMNTRITETETV-VAIDTNEVVIDIRAPE 419

Query: 419 EEDESPLEIVGVEVKHLPFYKLATQFGDLDQSKTYLLYCSRGVMSRLQALYLQEQGFNNV 478
           EE+  PLEI GVE+K +PF+KLATQF DLD+ KTYLLYC RGVMS+LQALYL EQG++NV
Sbjct: 420 EEENKPLEIEGVEIKRIPFFKLATQFADLDKQKTYLLYCERGVMSKLQALYLIEQGYHNV 479

Query: 479 KVYRP 483
           KVYRP
Sbjct: 480 KVYRP 484