Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., Flagellar motor rotation protein MotB from Pseudomonas fluorescens FW300-N2E2

 Score = 72.4 bits (176), Expect = 1e-17
 Identities = 65/283 (22%), Positives = 118/283 (41%), Gaps = 56/283 (19%)

Query: 17  WLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGVQNRLEVKDIPKGTSIIA 76
           WL ++AD ++LL  FFV++ S S ++  K+K I+ ++   F   +R  +K IP G     
Sbjct: 16  WLVSYADFITLLFAFFVVMYSISSVNEGKYKVISEALIGVFTDSDRA-LKPIPIG----- 69

Query: 77  QEFRPGRPEPTPIDVIMQQTIDITQQTLEFQEGESDRAGGNQRDSGQLTGGQSAETSVQD 136
            E RP    P                                           A+  V+D
Sbjct: 70  -EERPKTTTP-------------------------------------------AKPLVKD 85

Query: 137 NQNTQSEMQQQQAQAMSEQMETVAESIKKALSREIEQGAIEVENLGQQIDIRIREKGAFP 196
           ++  ++ +        S+ ++++A+ I  A    I    + V      ++I +     F 
Sbjct: 86  SEQVEAGIA-----GSSDPLKSIADDISAAFGDLISSNQMTVRGNELWVEIELNSSLLFG 140

Query: 197 EGSAFLQPKFRPLVRQIAELVKDIPGKVRVTGHTDNQKLDSELYRSNWDLSAQRAVSVAQ 256
            G A        ++ ++A ++K     + V G TD+Q + +  Y +NW+LS+ R+ S+ +
Sbjct: 141 SGDAMPSDMAFNIIDKVAAILKPFDNPIHVEGFTDDQPIRTAQYPTNWELSSARSASIVR 200

Query: 257 EMEKVKDFDHLRLQVRGLADTQPLGPNDTEAQRATNRRVEISI 299
            M  ++     RL   G  + QP+  N T   RA NRRV + +
Sbjct: 201 -MLAMQGVSPGRLASVGYGEFQPVANNATAEGRARNRRVVLVV 242