Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 217 a.a., Outer membrane protein and related peptidoglycan-associated (lipo)proteins from Pseudomonas stutzeri RCH2

 Score = 57.8 bits (138), Expect = 2e-13
 Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 9/198 (4%)

Query: 103 TLEFQEGESDRAGGNQRDSGQLTGGQSAETSVQDNQNTQSEMQQQQAQAMSEQMETVAES 162
           T E Q G++   GG    SG + G   A TS + ++   + +      A         ++
Sbjct: 25  TGEQQAGKAGVYGGIGAVSGAVIG---AATSSKKDRTKGALIGAAVGGAAGGGYGYYVDT 81

Query: 163 IKKALSREIEQGAIEVENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIAELVKDI-P 221
            +  L + ++   ++V+  G  + + +     F   SA +   F P +  + ++ K+   
Sbjct: 82  QEAKLRQTLQGTGVQVQRNGDNLTLIMPGNITFASNSADISSSFYPTLNSLVQVFKEFNK 141

Query: 222 GKVRVTGHTDNQKLDSELYRSNWDLSAQRAVSVAQEMEKVKDFDHLRLQVRGLADTQPLG 281
             V + GHTD+    +   + N DLS +RA SVA  +         R+   G   +QP+ 
Sbjct: 142 NGVDIVGHTDS----TGSLQLNQDLSNRRAQSVASYLVS-NGVAPARISSYGAGPSQPIA 196

Query: 282 PNDTEAQRATNRRVEISI 299
            NDT A RA NRRVEI++
Sbjct: 197 SNDTAAGRAQNRRVEINL 214