Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 280 a.a., Flagellar motor protein from Pseudomonas stutzeri RCH2

 Score = 86.7 bits (213), Expect = 6e-22
 Identities = 73/279 (26%), Positives = 117/279 (41%), Gaps = 55/279 (19%)

Query: 17  WLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGVQNRLEVKDIPKGTSIIA 76
           WL ++AD ++LL  FFV++ S S ++  K+K ++ S+   F   +R  VK IP G     
Sbjct: 16  WLVSYADFITLLFAFFVVMYSISSINEGKYKILSDSLVGVFNQVDR-SVKPIPIG----- 69

Query: 77  QEFRPGRPEPTPIDVIMQQTIDITQQTLEFQEGESDRAGGNQRDSGQLTGGQSAETSVQD 136
            E RP   EP                                            + S  D
Sbjct: 70  -EERPRTTEP--------------------------------------------DVSQVD 84

Query: 137 NQNTQSEMQQQQAQAMSEQMETVAESIKKALSREIEQGAIEVENLGQQIDIRIREKGAFP 196
           +   QS +     + + + +E +A+S+++     I    + V      I+I +     FP
Sbjct: 85  DPAAQSVLS---GEPVFDPLERIAQSMRETFGELIANEQLTVRGNELWIEIELNSSLLFP 141

Query: 197 EGSAFLQPKFRPLVRQIAELVKDIPGKVRVTGHTDNQKLDSELYRSNWDLSAQRAVSVAQ 256
            G A        L+ ++A ++      + V G TDN  + ++ + +NW+LSA RA SV +
Sbjct: 142 SGDALPNDHAFALIEKVAGILAPFDNPIHVEGFTDNLPISTDKFPTNWELSAARAGSVVR 201

Query: 257 EMEKVKDFDHLRLQVRGLADTQPLGPNDTEAQRATNRRV 295
            M   +  D  RL   G  + QP+  N T A RA NRRV
Sbjct: 202 -MLAAQGVDPSRLAAVGYGEFQPVADNATAAGRARNRRV 239