Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., Flagellar motor rotation protein MotB from Xanthomonas campestris pv. campestris strain 8004

 Score =  104 bits (259), Expect = 3e-27
 Identities = 81/285 (28%), Positives = 131/285 (45%), Gaps = 28/285 (9%)

Query: 16  AWLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGVQNRLEVKDIPKGTSII 75
           AW   +ADLM+LL+ FFV++ + S ++  K+K +A ++  AFG            G+S  
Sbjct: 16  AWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTTAFG------------GSSKA 63

Query: 76  AQEFRPGRPEPTPIDVIMQQTIDITQQTLEFQEGESDRAGGNQRDSGQLTGGQSAETSVQ 135
           A   + G  +    D      I          +  +  A  N      +    +A+  + 
Sbjct: 64  ASPVQLGNTQSLGADYDRPSVI----------KAGAPMAASNGPTDPTILPSMAAQMRMP 113

Query: 136 DNQNTQSEMQQQQAQAMSEQMETVAESIKKALSREIEQGAIEVENLGQQIDIRIREKGAF 195
            +   Q+++ + Q      QM+ VA+ + K LS  I++  I +      I++ I     F
Sbjct: 114 VSLRNQAQLARAQ-----RQMDAVAQQLNKTLSPLIDKQLITIRRRDLWIEVEINSDILF 168

Query: 196 PEGSAFLQPKFRPLVRQIAELVKDIPGKVRVTGHTDNQKLDSELYRSNWDLSAQRAVSVA 255
             GSA L    R  +  +A +++D P  VRV G+TDNQ + +  + SNW+LSA RA SV 
Sbjct: 169 VTGSALLAGSARGTLSTLAAVLRDAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVV 228

Query: 256 QEMEKVKDFDHLRLQVRGLADTQPLGPNDTEAQRATNRRVEISIL 300
             +   +     RL + G  + +    N TEA R  NRRV + IL
Sbjct: 229 -HLFADEGVAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIIL 272