Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., OmpA/MotB from Pseudomonas syringae pv. syringae B728a

 Score = 87.8 bits (216), Expect = 3e-22
 Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 55/283 (19%)

Query: 17  WLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGVQNRLEVKDIPKGTSIIA 76
           WL ++AD ++LL  FFV++ S S ++  K+K ++ ++   F    R  +K IP G     
Sbjct: 16  WLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFNDTERT-MKPIPIG----- 69

Query: 77  QEFRPGRPEPTPIDVIMQQTIDITQQTLEFQEGESDRAGGNQRDSGQLTGGQSAETSVQD 136
                   E  P+ +                                    + AE  V+D
Sbjct: 70  --------EQRPVSI------------------------------------KPAEPLVKD 85

Query: 137 NQNTQSEMQQQQAQAMSEQMETVAESIKKALSREIEQGAIEVENLGQQIDIRIREKGAFP 196
           ++ T + +     QA  + ++T+A+ ++ A    I+   + V      I+I +     F 
Sbjct: 86  SEQTDAGI----GQASDDPLQTIAQDVRDAFGDLIKSDQMTVRGNELWIEIELNSSMLFG 141

Query: 197 EGSAFLQPKFRPLVRQIAELVKDIPGKVRVTGHTDNQKLDSELYRSNWDLSAQRAVSVAQ 256
            G A    K   ++ ++A +VK     + V G TD+Q + +  + +NW+LS+ R+ S+ +
Sbjct: 142 SGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEGFTDDQPISTAQFPTNWELSSARSASIVR 201

Query: 257 EMEKVKDFDHLRLQVRGLADTQPLGPNDTEAQRATNRRVEISI 299
            M  +   +  RL   G  + QP+ PN + A RA NRRV + I
Sbjct: 202 -MLAMDGVNPARLASVGYGEFQPIVPNTSTAGRAKNRRVVLVI 243