Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 77.8 bits (190), Expect = 3e-19
 Identities = 84/348 (24%), Positives = 153/348 (43%), Gaps = 72/348 (20%)

Query: 11  PPGLPAWLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGVQNRLEVKDIPK 70
           P  +  W G    L +LLM    LL  F     L  ++I+G  +    V NRL    I +
Sbjct: 11  PRAINYWPGFVDALSTLLMAIMFLLSVFVTAQFLLGREISGKDE----VLNRLN-SQINE 65

Query: 71  GTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFQEGES-------DRAGGNQRDS-- 121
            T ++A E + G+ +       ++ ++   Q +L   EGE        DR  G+   +  
Sbjct: 66  LTQLLALE-KSGKQD-------LEDSLANLQASLSQSEGERSRLQALLDRGAGSAEVADE 117

Query: 122 --GQLTGGQSAETSVQDNQNTQSEMQQQQAQAMSEQMETVAESIKKALSREIEQGAIEVE 179
             G+L      E  V     +Q E+  QQ  A+  Q+  +  +++ + +++ +    ++ 
Sbjct: 118 KIGRLGSELENERQVSARAMSQIELLNQQIAALRSQIAAIEGALQASEAKD-DASQAKIA 176

Query: 180 NLGQQIDI------------------RIRE-------------------KGAFPEGSAFL 202
           +LG+++++                  R+RE                   +  FP G + L
Sbjct: 177 DLGRRLNVALAQRVQELNRYRSDFFGRLREILSDRENIRIVGDRFVFQSEVLFPSGGSDL 236

Query: 203 QPKFRPLVRQIA----ELVKDIPGKV----RVTGHTDNQKLDS-ELYRSNWDLSAQRAVS 253
            P+ +  + ++A    +L K+IP ++    RV GHTD+ +L     +R NW+LS+ RA S
Sbjct: 237 NPEGQTEMAKLATALLDLAKEIPAEINWVLRVDGHTDDVQLSGIGRFRDNWELSSARATS 296

Query: 254 VAQEMEKVKDFDHLRLQVRGLADTQPLGPNDTEAQRATNRRVEISILQ 301
           V + +   K     RL   G  + QP+ P +++  RA NRR+E+ + +
Sbjct: 297 VVKFLIS-KGVPADRLVAAGFGEYQPIAPGESQEARAQNRRIELKLTE 343