Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., OmpA/MotB (NCBI) from Rhodospirillum rubrum S1H

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 60/238 (25%), Positives = 103/238 (43%), Gaps = 48/238 (20%)

Query: 108 EGESDRAGGNQRDSGQLTGGQSAETSVQDNQNTQSEMQQQQAQAMSEQMETVAESIKKAL 167
           E E  R GG     G+  G  +AE ++ +     + +   Q + +  Q+  + +++  + 
Sbjct: 141 EAEVARLGGQL---GEKEGQIAAERTLSEEARAHAALLNAQLEQLQAQLGAIQQALDASE 197

Query: 168 SREIEQGAIEV-----------------------------ENLGQQIDIRI-------RE 191
           +R  EQ  +                               E LG + D+RI       + 
Sbjct: 198 ARSAEQKVVIADLGTRLNAALAEKVQELQRYRSEFFGRLREVLGAREDVRIVGDRFVFQS 257

Query: 192 KGAFPEGSAFLQPKFRPLVRQIAE----LVKDIPGKV----RVTGHTDNQKLDSELYRSN 243
           +  FP GS+ LQP  +  +  +A     +   IPG V    RV GHTD + +++  ++SN
Sbjct: 258 EVLFPSGSSQLQPAGQDTLASLATTLMAIAARIPGDVDWILRVDGHTDRRPINTAAFQSN 317

Query: 244 WDLSAQRAVSVAQEMEKVKDFDHLRLQVRGLADTQPLGPNDTEAQRATNRRVEISILQ 301
           W LSA RA+SV   + + +     RL   G  + QP+ P  ++   A NRR+E+ + Q
Sbjct: 318 WQLSAARAISVVNFLIE-RGVPPERLAAAGFGEYQPIDPGQSDEALARNRRIELKLDQ 374