Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., type VI secretion system protein DotU from Pseudomonas aeruginosa PA14

 Score = 81.6 bits (200), Expect = 3e-20
 Identities = 47/137 (34%), Positives = 79/137 (57%), Gaps = 1/137 (0%)

Query: 163 IKKALSREIEQGAIEVENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIAELVKDIPG 222
           + + L+ +I+   + VE+   +  + IR    F   SA ++ +F+PL+ +IA+ ++ + G
Sbjct: 308 LARFLADDIKAQRVAVEDAVDRSVVTIRGDELFASASASVRDEFQPLLLRIADALRKVKG 367

Query: 223 KVRVTGHTDNQKLDSELYRSNWDLSAQRAVSVAQEMEKVKDFDHLRLQVRGLADTQPLGP 282
           +V VTGH+DN+ + +  Y SNW LS  RA  VA ++      D  R    G +DT+P+  
Sbjct: 368 QVLVTGHSDNRPIATLRYPSNWKLSQARAQEVA-DLLGATTGDAGRFTAEGRSDTEPVAT 426

Query: 283 NDTEAQRATNRRVEISI 299
           N +   RA NRRVEI++
Sbjct: 427 NASAEGRARNRRVEITV 443