Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., flagellar motor protein MotB from Marinobacter adhaerens HP15

 Score =  215 bits (548), Expect = 1e-60
 Identities = 126/299 (42%), Positives = 163/299 (54%), Gaps = 34/299 (11%)

Query: 12  PGLPAWLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGVQNRLEVKDIPKG 71
           PG+PAW+ TFADLMSLLMCFFVLLLSFSE+D  KFKQIAG +  AFGVQ  +   +IPKG
Sbjct: 10  PGIPAWVVTFADLMSLLMCFFVLLLSFSEIDAQKFKQIAGELSKAFGVQRDVPALEIPKG 69

Query: 72  TSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFQEGESDRAGGNQRDSGQLTGGQSAE 131
           TS I  +F P  PEPT ++ + Q T D                                 
Sbjct: 70  TSPIFDKFSPAPPEPTVVNEVKQTTTD--------------------------------- 96

Query: 132 TSVQDNQNTQSEMQQQQAQAMSEQMETVAESIKKALSREIEQGAIEVENLGQQIDIRIRE 191
               + Q  +S        AM EQM+   + I K L   I  G I V    ++I IR+ E
Sbjct: 97  -EAPELQTLKSPTDMAVEAAMEEQMQETMDDILKVLEPAIADGRINVSEDQRRIVIRVEE 155

Query: 192 KGAFPEGSAFLQPKFRPLVRQIAELVKDIPGKVRVTGHTDNQKLDSELYRSNWDLSAQRA 251
           KG+FP GSA L  +F  L+  +AE+++ IPG + + GHTDN  + ++ + SNWDLSA R+
Sbjct: 156 KGSFPSGSAQLTWEFEGLLLDMAEVIEGIPGDLTIEGHTDNVPIRTDRFYSNWDLSAARS 215

Query: 252 VSVAQEMEKVKDFDHLRLQVRGLADTQPLGPNDTEAQRATNRRVEISILQGDPVYSDEV 310
            +VA  +      +  RL V GLADT+P  PN +   RA NRRVEI I    P+   EV
Sbjct: 216 AAVANVLVARDQVEPTRLSVTGLADTKPRVPNTSAENRAKNRRVEIIIDLSGPMQEQEV 274