Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 570 a.a., OmpA family protein from Pantoea sp. MT58

 Score = 53.9 bits (128), Expect = 9e-12
 Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 7/116 (6%)

Query: 187 IRIREKGAFPEGSAFLQP-KFRPLVRQIAELVKDIPG-KVRVTGHTDNQKLDSELYRSNW 244
           +R+     F  G A L+    R LV  +   +K  PG  + V+GHTDN        + N 
Sbjct: 433 VRLDSMSLFDSGKAVLKTGSTRMLVNSLVG-IKAKPGWLIVVSGHTDNTGNP----QLNQ 487

Query: 245 DLSAQRAVSVAQEMEKVKDFDHLRLQVRGLADTQPLGPNDTEAQRATNRRVEISIL 300
            LS +RA +V   M    D       V+G  +++P+  NDT A RA NRRVEIS++
Sbjct: 488 TLSLRRAAAVRDWMRDTGDVPESCFAVQGYGESRPVATNDTPAGRALNRRVEISLV 543